RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 FAM87AP0C7U9 286 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 IMPDH2P12268 514 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 APEHP13798 732 aaKnown RBP8.77□□□□□ -1.01
CCM2-204ENST00000470837 ZNF43P17038 809 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 ENPP1P22413 925 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 EEF1B2P24534 225 aaKnown RBP8.77□□□□□ -1.01
CCM2-204ENST00000470837 ACVR2AP27037 513 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 UQCRC1P31930 480 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 STARP49675 285 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 RAC3P60763 192 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 ERVK-25P63136 954 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 FOXK2Q01167 660 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 LTBQ06643 244 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 MAD2L1BPQ15013 274 aaPredicted RBP8.77□□□□□ -1.01
CCM2-204ENST00000470837 GXYLT1Q4G148 440 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 EMC4Q5J8M3 183 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 RBM48Q5RL73 367 aaKnown RBP8.77□□□□□ -1.01
CCM2-204ENST00000470837 SLC35F1Q5T1Q4 408 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 MEDAGQ5VYS4 303 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 FAM205BPQ63HN1 556 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 GPAT4Q86UL3 456 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 IGFN1Q86VF2 1251 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 UEVLDQ8IX04 471 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 ENTHD1Q8IYW4 607 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 RBMXL3Q8N7X1 1067 aaKnown RBP8.77□□□□□ -1.01
CCM2-204ENST00000470837 TCEANCQ8N8B7 351 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 OR8D4Q8NGM9 314 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 MOSPD2Q8NHP6 518 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 TMEM163Q8TC26 289 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 RFKQ969G6 155 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 PNPLA2Q96AD5 504 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 SARAFQ96BY9 339 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 GPX7Q96SL4 187 aaPredicted RBP8.77□□□□□ -1.01
CCM2-204ENST00000470837 PRRG4Q9BZD6 226 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 MCTS1Q9ULC4 181 aaKnown RBP8.77□□□□□ -1.01
CCM2-204ENST00000470837 RNF6Q9Y252 685 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 TPRKBQ9Y3C4 175 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 NOX1Q9Y5S8 564 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 ACACAQ13085 2346 aa8.77□□□□□ -1.01
CCM2-204ENST00000470837 EXPH5Q8NEV8 1989 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 A0A0J9YW62 118 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 SH3D21A4FU49 640 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 MAGEA13PA6NCF6 341 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 A6NIZ1 184 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 AQP7P3A6NL99 342 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 PRR23D1E9PI22 279 aaPredicted RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 NPIPA2E9PIF3 369 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 NPIPA3F8WFD2 350 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 BHLHE40O14503 412 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 ARPC3O15145 178 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 SURF4O15260 269 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 AKAP8O43823 692 aaKnown RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 FAM20BO75063 409 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 PLGP00747 810 aaPredicted RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 RENP00797 406 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 PDGFAP04085 211 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 PRR23D2P0DMB1 279 aaPredicted RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 SHC1P29353 583 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 SDHAP31040 664 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 MLLT10P55197 1068 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 CLDN15P56746 228 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 CLDN20P56880 219 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 RAP1BP61224 184 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 ISL1P61371 349 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 RPS7P62081 194 aaKnown RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 SNRPGP62308 76 aaKnown RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 RAP1AP62834 184 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 HSF1Q00613 529 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 TEKQ02763 1124 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 POU3F1Q03052 451 aaPredicted RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 LGALS3BPQ08380 585 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 CD47Q08722 323 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 ZP4Q12836 540 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 CDK5R2Q13319 367 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 SF3B4Q15427 424 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCM2-204ENST00000470837 PLEKHN1Q494U1 663 aaPredicted RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 C6orf141Q5SZD1 244 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 ACSM5Q6NUN0 579 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 THSD4Q6ZMP0 1018 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 TRILQ7L0X0 811 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 PXKQ7Z7A4 578 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 GID4Q8IVV7 300 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 MCEMP1Q8IX19 187 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 PM20D2Q8IYS1 436 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 LSM14AQ8ND56 463 aaKnown RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 BPIFB6Q8NFQ5 453 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 OR52E2Q8NGJ4 325 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 OR4Q3Q8NH05 313 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 OR10D3Q8NH80 312 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 RHOXF1Q8NHV9 184 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 CNIH3Q8TBE1 160 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 HDAC2Q92769 488 aaKnown RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 LRR1Q96L50 414 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 OXGR1Q96P68 337 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 TSPAN10Q9H1Z9 355 aaPredicted RBP8.76□□□□□ -1.01
CCM2-204ENST00000470837 FN3KQ9H479 309 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 NRIP3Q9NQ35 241 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 CMC2Q9NRP2 79 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 TAS2R5Q9NYW4 299 aa8.76□□□□□ -1.01
CCM2-204ENST00000470837 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms