RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 KATNB1Q9BVA0 655 aa13.6□□□□□ -0.23
COL4A5-203ENST00000470339 CCNB1IP1Q9NPC3 277 aa13.6□□□□□ -0.23
COL4A5-203ENST00000470339 INIPQ9NRY2 104 aa13.6□□□□□ -0.23
COL4A5-203ENST00000470339 IER3IP1Q9Y5U9 82 aa13.6□□□□□ -0.23
COL4A5-203ENST00000470339 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
COL4A5-203ENST00000470339 FRYQ5TBA9 3013 aa13.6□□□□□ -0.23
COL4A5-203ENST00000470339 DMXL2Q8TDJ6 3036 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 A0A087WXM4 84 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 A0A1W2PNV4 684 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 TRIM64CA6NLI5 447 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 KDM4EB2RXH2 506 aaPredicted RBP13.59□□□□□ -0.23
COL4A5-203ENST00000470339 MS4A18H0YCH9 400 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 SULT2B1O00204 365 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 SEC14L5O43304 696 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 EIF1BO60739 113 aaKnown RBP13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ENTPD6O75354 484 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 IGHMP01871 453 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ITGB2P05107 769 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ADORA3P0DMS8 318 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ZNF3P17036 446 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 SHC1P29353 583 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 SDHAP31040 664 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 SFTPDP35247 375 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 DIO1P49895 249 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 OR2B6P58173 313 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 TUBA4AP68366 448 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 PUDPQ08623 228 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 BCL2A1Q16548 175 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 SMN1Q16637 294 aaKnown RBP13.59□□□□□ -0.23
COL4A5-203ENST00000470339 MS4A18Q3C1V0 323 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 AADACL4Q5VUY2 407 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 PAQR6Q6TCH4 344 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ESPNLQ6ZVH7 1005 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 PXKQ7Z7A4 578 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 LSRQ86X29 649 aaPredicted RBP13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ANKK1Q8NFD2 765 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 LRR1Q96L50 414 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 TMEM185BQ9H7F4 350 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ZDHHC11Q9H8X9 412 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 FKBP14Q9NWM8 211 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 CNOT2Q9NZN8 540 aaKnown RBP13.59□□□□□ -0.23
COL4A5-203ENST00000470339 AASSQ9UDR5 926 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 PSORS1C1Q9UIG5 152 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 RPL36Q9Y3U8 105 aaKnown RBP13.59□□□□□ -0.23
COL4A5-203ENST00000470339 CSAG2Q9Y5P2 127 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 MED12Q93074 2177 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 NCOR2Q9Y618 2525 aa13.59□□□□□ -0.23
COL4A5-203ENST00000470339 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.23
COL4A5-203ENST00000470339 ASPMQ8IZT6 3477 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 A0A1W2PNR3 127 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 EFCAB10A6NFE3 127 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 CLCA1A8K7I4 914 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 M0R129 80 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 PRODHO43272 600 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 RNF13O43567 381 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 FAM20BO75063 409 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 ACTL6AO96019 429 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 MAGEA5P43359 124 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 AGFG1P52594 562 aaKnown RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 RAC3P60763 192 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 ERVK-25P63136 954 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 SLC35A2P78381 396 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 H3F3AP84243 136 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 TMED1Q13445 227 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 BLMHQ13867 455 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 ZNF169Q14929 603 aaPredicted RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 TBR1Q16650 682 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 GXYLT1Q4G148 440 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 NXNL2Q5VZ03 156 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 TMEM154Q6P9G4 183 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 Q6ZS92 163 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 IGFN1Q86VF2 1251 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 GID4Q8IVV7 300 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 ZNF582Q96NG8 517 aaPredicted RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 SNX18Q96RF0 628 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 NAA11Q9BSU3 229 aaPredicted RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 MRPS26Q9BYN8 205 aaKnown RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 TXNIPQ9H3M7 391 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 MRPS18AQ9NVS2 196 aaKnown RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 H2AFY2Q9P0M6 372 aaPredicted RBP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 GRHPRQ9UBQ7 328 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL4A5-203ENST00000470339 RAXQ9Y2V3 346 aa13.58□□□□□ -0.24
COL4A5-203ENST00000470339 CFAP47Q6ZTR5 3102 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 A0A0J9YW62 118 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 A0A1W2PRG6 482 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 IRGMA1A4Y4 181 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 AQP7P3A6NL99 342 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 FAM166BA8MTA8 275 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 PRR23D1E9PI22 279 aaPredicted RBP13.57□□□□□ -0.24
COL4A5-203ENST00000470339 XPNPEP2O43895 674 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 SMNDC1O75940 238 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL4A5-203ENST00000470339 AKR7A3O95154 331 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 VAMP5O95183 116 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 SLC2A10O95528 541 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 F13BP05160 661 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
COL4A5-203ENST00000470339 PRR23D2P0DMB1 279 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms