RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-208	ENST00000470171	MED12L	Q86YW9	2145 aa		13.61	□□□□□ -0.23
FDPS-208	ENST00000470171	RAMP1	O60894	148 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	SLC43A1	O75387	559 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	OR5F1	O95221	314 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	NQO1	P15559	274 aa	Known RBP	13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	KDELR2	P33947	212 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	ENTPD8	Q5MY95	495 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	TSPO2	Q5TGU0	170 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	TGIF2LY	Q8IUE0	185 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	EPHX4	Q8IUS5	362 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	UEVLD	Q8IX04	471 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	MICU2	Q8IYU8	434 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	FAM169B	Q8N8A8	192 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	GPR32P1	Q8NGA4	272 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	OR6T1	Q8NGN1	323 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	ADAMTS16	Q8TE57	1224 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	TMEM171	Q8WVE6	324 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	NRGN	Q92686	78 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	FKRP	Q9H9S5	495 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	UBTD1	Q9HAC8	227 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	SLC7A10	Q9NS82	523 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	SLC25A15	Q9Y619	301 aa		13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	ANKRD17	O75179	2603 aa	Known RBP	13.6	□□□□□ -0.23
FDPS-208	ENST00000470171	CCDC168	Q8NDH2	2452 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	CSMD2	Q7Z408	3487 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	IGKV1D-42	A0A075B6H8	117 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171		M0R082	166 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	SNX3	O60493	162 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	TPST2	O60704	377 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	OR6A2	O95222	327 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	HIST1H2AB	P04908	130 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	GRPR	P30550	384 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	LSP1	P33241	339 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	NTF4	P34130	210 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	SELENOW	P63302	87 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	PUDP	Q08623	228 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	PMS2P3	Q13401	168 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ETFDH	Q16134	617 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	HMBOX1	Q6NT76	420 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	HIST3H2A	Q7L7L0	130 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	HDDC2	Q7Z4H3	204 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ZNF417	Q8TAU3	575 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	HIST1H2AC	Q93077	130 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	FBXW5	Q969U6	566 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	RCN3	Q96D15	328 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ADAD1	Q96M93	576 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ZNF385A	Q96PM9	386 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ELAC2	Q9BQ52	826 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ZNF426	Q9BUY5	554 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	GSX2	Q9BZM3	304 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	B3GAT2	Q9NPZ5	323 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	SLC17A5	Q9NRA2	495 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	NDE1	Q9NXR1	346 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ARMCX1	Q9P291	453 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	ZNF229	Q9UJW7	825 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	SH3GLB1	Q9Y371	365 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	SPG11	Q96JI7	2443 aa		13.59	□□□□□ -0.23
FDPS-208	ENST00000470171	PCNX3	Q9H6A9	2034 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171		A0A1W2PPR1	153 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171		M0R3H8	397 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	DYNC1I1	O14576	645 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	MGRN1	O60291	552 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	GMNN	O75496	209 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	RAD51D	O75771	328 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	BGLAP	P02818	100 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	OPN1SW	P03999	348 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	ITGA5	P08648	1049 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	MNAT1	P51948	309 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	NKX6-1	P78426	367 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	ZP4	Q12836	540 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	SPATS1	Q496A3	300 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	ZNF672	Q499Z4	452 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	NIPAL3	Q6P499	406 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	ANKRD16	Q6P6B7	361 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	COMTD1	Q86VU5	262 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	P3H2	Q8IVL5	708 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	SLC15A3	Q8IY34	581 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	GPR137C	Q8N3F9	429 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	C10orf53	Q8N6V4	93 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	OR5J2	Q8NH18	312 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	HS3ST6	Q96QI5	342 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	MYLK2	Q9H1R3	596 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	NANS	Q9NR45	359 aa		13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	STX18	Q9P2W9	335 aa	Known RBP	13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	FBXO9	Q9UK97	447 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-208	ENST00000470171	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	CPSF4L	A6NMK7	179 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	ZNF726	A6NNF4	738 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	FAM171A2	A8MVW0	826 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	CENPBD1	B2RD01	187 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	DCTN3	O75935	186 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	ZNF432	O94892	652 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	IGHV3-9	P01782	118 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	BMP4	P12644	408 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	CD99	P14209	185 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	CLDN17	P56750	224 aa		13.57	□□□□□ -0.24
FDPS-208	ENST00000470171	TAS2R41	P59536	307 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms