RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SEM1Q6ZVN7 128 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 MEX3DQ86XN8 651 aaKnown RBP13.57□□□□□ -0.24
SNIP1-202ENST00000468040 CCDC103Q8IW40 242 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 RPRMLQ8N4K4 120 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 C9orf106Q8NAJ2 232 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 OR13C2Q8NGS9 318 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 GMPPAQ96IJ6 420 aaPredicted RBP13.57□□□□□ -0.24
SNIP1-202ENST00000468040 DMRTA2Q96SC8 542 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 FEVQ99581 238 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 OSBPL10Q9BXB5 764 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 DGCR6LQ9BY27 220 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 DCLRE1BQ9H816 532 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF556Q9HAH1 456 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 FANCFQ9NPI8 374 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 EMC3Q9P0I2 261 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 SEC14L4Q9UDX3 406 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 HIF3AQ9Y2N7 669 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 KIAA1549Q9HCM3 1950 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 IGKV3D-15A0A087WSY6 115 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 UNC119BA6NIH7 251 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 BLOC1S5-TXNDC5H3BN57 136 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 GPR171O14626 319 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 GASTP01350 101 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 CRHP06850 196 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 ADORA3P0DMS8 318 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 ANPEPP15144 967 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 KLK2P20151 261 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 AHCYP23526 432 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 UQCRC1P31930 480 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 PRPS1P60891 318 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 IL1RL1Q01638 556 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 ZP4Q12836 540 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 SLC17A1Q14916 467 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 POU4F3Q15319 338 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 ZBED5Q49AG3 693 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 EEF1A1P5Q5VTE0 462 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 PXKQ7Z7A4 578 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 HS3ST5Q8IZT8 346 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 ATG16L2Q8NAA4 619 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 ICA1LQ8NDH6 482 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 OR51A7Q8NH64 312 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 RND1Q92730 232 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 OXGR1Q96P68 337 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 BCO1Q9HAY6 547 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 KIF17Q9P2E2 1029 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 KLHL13Q9P2N7 655 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 OAZ3Q9UMX2 235 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 RRP15Q9Y3B9 282 aaKnown RBP13.56□□□□□ -0.24
SNIP1-202ENST00000468040 CHD6Q8TD26 2715 aa13.56□□□□□ -0.24
SNIP1-202ENST00000468040 POLEQ07864 2286 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 TRAV27A0A087WT01 109 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 SAC3D1A6NKF1 404 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF716A6NP11 495 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 HSPB2A8KAH6 182 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF724A8MTY0 619 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 MS4A18H0YCH9 400 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 RAMP1O60894 148 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 SS18L1O75177 396 aaPredicted RBP13.55□□□□□ -0.24
SNIP1-202ENST00000468040 TOXO94900 526 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 YES1P07947 543 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 TMIGD3P0DMS9 266 aaPredicted RBP13.55□□□□□ -0.24
SNIP1-202ENST00000468040 POU2F1P14859 743 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF43P17038 809 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 CEACAM8P31997 349 aaPredicted RBP13.55□□□□□ -0.24
SNIP1-202ENST00000468040 RPL18Q07020 188 aaKnown RBP13.55□□□□□ -0.24
SNIP1-202ENST00000468040 COX10Q12887 443 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
SNIP1-202ENST00000468040 HSPB2Q16082 182 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 MS4A18Q3C1V0 323 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 TMEM201Q5SNT2 666 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 RPL13AP3Q6NVV1 102 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 FAHD1Q6P587 224 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 CD300LDQ6UXZ3 194 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 FJX1Q86VR8 437 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 UEVLDQ8IX04 471 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 MARVELD2Q8N4S9 558 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 ANKK1Q8NFD2 765 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 OR9K2Q8NGE7 335 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 GTPBP3Q969Y2 492 aaKnown RBP13.55□□□□□ -0.24
SNIP1-202ENST00000468040 GPA33Q99795 319 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 GABARAPL1Q9H0R8 117 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 TAS2R5Q9NYW4 299 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 B3GAT1Q9P2W7 334 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 STX18Q9P2W9 335 aaKnown RBP13.55□□□□□ -0.24
SNIP1-202ENST00000468040 SIGLEC7Q9Y286 467 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 EMC9Q9Y3B6 208 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 NOX1Q9Y5S8 564 aa13.55□□□□□ -0.24
SNIP1-202ENST00000468040 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 CFAP46Q8IYW2 2715 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 LRRTM2O43300 516 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 RNF13O43567 381 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 PRKACGP22612 351 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 AQP2P41181 271 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 GUSBP1Q15486 140 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 ALG10Q5BKT4 473 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF620Q6ZNG0 422 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms