RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZP4Q12836 540 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 PMS2P3Q13401 168 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 MICAQ29983 383 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 TMEM225Q6GV28 225 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 C1orf94Q6P1W5 598 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 CLEC18BQ6UXF7 455 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 NCCRP1Q6ZVX7 275 aaPredicted RBP14.25□□□□□ -0.13
GPC1-207ENST00000466624 HIST3H2AQ7L7L0 130 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 NANOGNBQ7Z5D8 188 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 CCDC103Q8IW40 242 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 CLEC18CQ8NCF0 446 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 ASB5Q8WWX0 329 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 PYDC1Q8WXC3 89 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 HIST1H2ACQ93077 130 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 INTS12Q96CB8 462 aaKnown RBP14.25□□□□□ -0.13
GPC1-207ENST00000466624 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 OXGR1Q96P68 337 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 BDH2Q9BUT1 245 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 COQ3Q9NZJ6 369 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 SEC14L4Q9UDX3 406 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 RNF6Q9Y252 685 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 EMC9Q9Y3B6 208 aa14.25□□□□□ -0.13
GPC1-207ENST00000466624 EFCAB9A8MZ26 197 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 ANKRD65E5RJM6 399 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 MS4A18H0YCH9 400 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 H3BNX3 289 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 PLPP3O14495 311 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 KLF4O43474 513 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 TNFSF13O75888 250 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 SAGP10523 405 aaPredicted RBP14.24□□□□□ -0.13
GPC1-207ENST00000466624 CBLP22681 906 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 FPR3P25089 353 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 AGTR1P30556 359 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 CHRNB4P30926 498 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 RPS4XP62701 263 aaKnown RBP14.24□□□□□ -0.13
GPC1-207ENST00000466624 PUDPQ08623 228 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 MS4A18Q3C1V0 323 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 TMEM201Q5SNT2 666 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 ZNF770Q6IQ21 691 aaPredicted RBP14.24□□□□□ -0.13
GPC1-207ENST00000466624 ZER1Q7Z7L7 766 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 GCNT2Q8N0V5 402 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 LRRC17Q8N6Y2 441 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 OR6K3Q8NGY3 331 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 FAM46AQ96IP4 442 aaKnown RBP14.24□□□□□ -0.13
GPC1-207ENST00000466624 NTN4Q9HB63 628 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 B3GAT1Q9P2W7 334 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 HIF3AQ9Y2N7 669 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 U3KQV3 271 aa14.24□□□□□ -0.13
GPC1-207ENST00000466624 WIPF3A6NGB9 483 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 DVL2O14641 736 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 E2F6O75461 281 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 UQCRC1P31930 480 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 KIR2DL2P43627 348 aaPredicted RBP14.23□□□□□ -0.13
GPC1-207ENST00000466624 GPR4P46093 362 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 ARHGDIAP52565 204 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 FOXF2Q12947 444 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 PGBD2Q6P3X8 592 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 XKRXQ6PP77 449 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 PXKQ7Z7A4 578 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 OAFQ86UD1 273 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 TUSC5Q8IXB3 177 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 ZNF808Q8N4W9 903 aaPredicted RBP14.23□□□□□ -0.13
GPC1-207ENST00000466624 FAM26EQ8N5C1 309 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 OR9K2Q8NGE7 335 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 GNPDA2Q8TDQ7 276 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 GIPC3Q8TF64 312 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 LRTOMTQ8WZ04 291 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 STMN2Q93045 179 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 TMEM45BQ96B21 275 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 DGCR6LQ9BY27 220 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 PIGMQ9H3S5 423 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 S100A14Q9HCY8 104 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 TAS2R5Q9NYW4 299 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 MGAT4BQ9UQ53 548 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 NOX1Q9Y5S8 564 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 FLVCR1Q9Y5Y0 555 aa14.23□□□□□ -0.13
GPC1-207ENST00000466624 CDC42EP2O14613 210 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 OR6A2O95222 327 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 ADORA3P0DMS8 318 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 CD8BP10966 210 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 ZNF43P17038 809 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 GSSP48637 474 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 PRPS1P60891 318 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 SRSF1Q07955 248 aaKnown RBP eCLIP14.22□□□□□ -0.13
GPC1-207ENST00000466624 PPP1R8Q12972 351 aaKnown RBP14.22□□□□□ -0.13
GPC1-207ENST00000466624 TSPAN31Q12999 210 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 FHL1Q13642 323 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 ZBED5Q49AG3 693 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 SHQ1Q6PI26 577 aaKnown RBP14.22□□□□□ -0.13
GPC1-207ENST00000466624 CREB3L2Q70SY1 520 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 GALNT5Q7Z7M9 940 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 TMEM179BQ7Z7N9 219 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 GPAT4Q86UL3 456 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 CCDC71Q8IV32 467 aaPredicted RBP14.22□□□□□ -0.13
GPC1-207ENST00000466624 ANKK1Q8NFD2 765 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 OR10G2Q8NGC3 310 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 OR9Q2Q8NGE9 314 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 OR5K1Q8NHB7 308 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 SDCCAG3Q96C92 435 aa14.22□□□□□ -0.13
GPC1-207ENST00000466624 CENPNQ96H22 339 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms