RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ASB18Q6ZVZ8 466 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 LSM14AQ8ND56 463 aaKnown RBP10.9□□□□□ -0.66
VPS16-206ENST00000466415 ADPRHL1Q8NDY3 354 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 ANKK1Q8NFD2 765 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 BPIFB6Q8NFQ5 453 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 OR2V1Q8NHB1 315 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 RHOXF1Q8NHV9 184 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 FBLIM1Q8WUP2 373 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 ABTB1Q969K4 478 aaPredicted RBP10.9□□□□□ -0.66
VPS16-206ENST00000466415 UBE2FQ969M7 185 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 ABHD17AQ96GS6 310 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 YTHDF1Q9BYJ9 559 aaKnown RBP10.9□□□□□ -0.66
VPS16-206ENST00000466415 ENKD1Q9H0I2 346 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 DEFB127Q9H1M4 99 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 ACKR4Q9NPB9 350 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 TIGARQ9NQ88 270 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 CMC2Q9NRP2 79 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 DNAJC27Q9NZQ0 273 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 H2AFY2Q9P0M6 372 aaPredicted RBP10.9□□□□□ -0.66
VPS16-206ENST00000466415 GRHPRQ9UBQ7 328 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 AASSQ9UDR5 926 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 B3GNT3Q9Y2A9 372 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 TP53TG5Q9Y2B4 290 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 B3GALT5Q9Y2C3 310 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 TPRKBQ9Y3C4 175 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 MED13Q9UHV7 2174 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 EML6Q6ZMW3 1958 aa10.9□□□□□ -0.66
VPS16-206ENST00000466415 A0A0J9YW62 118 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 TEX13CA0A0J9YWL9 993 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 A0A1W2PNV4 684 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 SH3D21A4FU49 640 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 NPIPA5E9PKD4 350 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 XKRYO14609 159 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 IMPA2O14732 288 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 DNPH1O43598 174 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 IDH3BO43837 385 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 ACTL6AO96019 429 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 TSPAN19P0C672 248 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 APEHP13798 732 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 EEF1B2P24534 225 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 ACVR2AP27037 513 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 SDHAP31040 664 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 EIF1AXP47813 144 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 STARP49675 285 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 DAP3P51398 398 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 CLDN20P56880 219 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 CXCR4P61073 352 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 CSNK2BP67870 215 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS16-206ENST00000466415 ZP4Q12836 540 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 KRR1Q13601 381 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 KCTD21Q4G0X4 260 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 PAQR6Q6TCH4 344 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 CXXC5Q7LFL8 322 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 GID4Q8IVV7 300 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 CCDC103Q8IW40 242 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 RBMXL3Q8N7X1 1067 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 LRRC75AQ8NAA5 344 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 SDR9C7Q8NEX9 313 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 OR52E2Q8NGJ4 325 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 C9orf43Q8TAL5 461 aaPredicted RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 NEIL3Q8TAT5 605 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 SNRNP27Q8WVK2 155 aaKnown RBP10.89□□□□□ -0.67
VPS16-206ENST00000466415 APH1BQ8WW43 257 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 ZNF566Q969W8 418 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 RASD2Q96D21 266 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 LRR1Q96L50 414 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 FN3KQ9H479 309 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 ZNF696Q9H7X3 374 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 ZDHHC11Q9H8X9 412 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 NRIP3Q9NQ35 241 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 TAS2R5Q9NYW4 299 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 SCOCQ9UIL1 159 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 NPIPA1Q9UND3 350 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 GPR52Q9Y2T5 361 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 ADAM18Q9Y3Q7 739 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 LIPGQ9Y5X9 500 aa10.89□□□□□ -0.67
VPS16-206ENST00000466415 AQP7P3A6NL99 342 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 EIF4E1BA6NMX2 242 aaKnown RBP10.88□□□□□ -0.67
VPS16-206ENST00000466415 TAF4O00268 1085 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 ARPC3O15145 178 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 CXCL13O43927 109 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 FZD7O75084 574 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 ENTPD6O75354 484 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 WBP4O75554 376 aaKnown RBP10.88□□□□□ -0.67
VPS16-206ENST00000466415 SLC2A10O95528 541 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 RENP00797 406 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 CCDC159P0C7I6 412 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 HIST1H1CP16403 213 aaKnown RBP10.88□□□□□ -0.67
VPS16-206ENST00000466415 GABRB1P18505 474 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 ENPP1P22413 925 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 LHX2P50458 406 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 NUDT6P53370 316 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 CARD18P57730 90 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 GABARAPL2P60520 117 aa10.88□□□□□ -0.67
VPS16-206ENST00000466415 RAC3P60763 192 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms