RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CLK1P49759 484 aaKnown RBP8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 GZMMP51124 257 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 PDK3Q15120 406 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 ENTPD8Q5MY95 495 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 C9orf135Q5VTT2 229 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 TMEM225Q6GV28 225 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 STAC2Q6ZMT1 411 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 DEF8Q6ZN54 512 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 C22orf34Q6ZV56 151 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 CDC20BQ86Y33 519 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC30A8Q8IWU4 369 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 KDM8Q8N371 416 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 OR2T12Q8NG77 320 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 OR6T1Q8NGN1 323 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 S100PBPQ96BU1 408 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 KTI12Q96EK9 354 aaPredicted RBP8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 DACH2Q96NX9 599 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 C9orf16Q9BUW7 83 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 TRIM2Q9C040 744 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF696Q9H7X3 374 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 FANCFQ9NPI8 374 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF226Q9NYT6 803 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 ACTR3BQ9P1U1 418 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 ABCD2Q9UBJ2 740 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 SEC14L4Q9UDX3 406 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 RIMS3Q9UJD0 308 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 TRAPPC4Q9Y296 219 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 PLEKHA6Q9Y2H5 1048 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 COMMD3-BMI1R4GMX3 469 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 CSMD1Q96PZ7 3565 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 UNC79Q9P2D8 2635 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 CSMD2Q7Z408 3487 aa8.63□□□□□ -1.03
RTFDC1-205ENST00000466260 PRR14LQ5THK1 2151 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 LIPT2A6NK58 231 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF724A8MTY0 619 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 LRRN3E7EW58 273 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 KPNA4O00629 521 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 DNPH1O43598 174 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 EIF1BO60739 113 aaKnown RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 MRPL33O75394 65 aaKnown RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 RAD51DO75771 328 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 SERPINI2O75830 405 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 LGI1O95970 557 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 HRGP04196 525 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 PNMTP11086 282 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 CD247P20963 164 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 FKBP2P26885 142 aaKnown RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC7A2P52569 658 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 CDH12P55289 794 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 ROR2Q01974 943 aaKnown RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 EGR4Q05215 589 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 NPTX1Q15818 432 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 LCN8Q6JVE9 175 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 C8orf82Q6P1X6 216 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 ERICH5Q6P6B1 374 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 PAQR6Q6TCH4 344 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 CARM1Q86X55 608 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 CALHM3Q86XJ0 350 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 MICU2Q8IYU8 434 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 C10orf53Q8N6V4 93 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 STK35Q8TDR2 534 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 PROX1Q92786 737 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 KISS1RQ969F8 398 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC38A4Q969I6 547 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC35B4Q969S0 331 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 APH1AQ96BI3 265 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 SLC47A1Q96FL8 570 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 TPD52L3Q96J77 140 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF583Q96ND8 569 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 ZNF385AQ96PM9 386 aaKnown RBP8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 ARHGDIGQ99819 225 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 POTEKPQ9BYX7 375 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 GP6Q9HCN6 339 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 CMTM6Q9NX76 183 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 UPB1Q9UBR1 384 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 CD300AQ9UGN4 299 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 SH3GLB1Q9Y371 365 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 FLVCR1Q9Y5Y0 555 aa8.62□□□□□ -1.03
RTFDC1-205ENST00000466260 FBN2P35556 2912 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 IGKV1D-42A0A075B6H8 117 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 A0A0B4J2E0 115 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 A0A1B0GX12 115 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 A0A1W2PPR1 153 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 A0A1W2PR80 420 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 CIB4A0PJX0 185 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 ELOVL7A1L3X0 281 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 AQP7P3A6NL99 342 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 J3QL48 77 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 M0R082 166 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 NME4O00746 187 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 GPR171O14626 319 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 GSTA4O15217 222 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 CLPTM1O96005 669 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 THBDP07204 575 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 CDH2P19022 906 aaPredicted RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 IGHV1-2P23083 117 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 FASP25445 335 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 GRPRP30550 384 aa8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 DNAJA1P31689 397 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-205ENST00000466260 TTKP33981 857 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms