RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NRIP2Q9BQI9 281 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 NUP58Q9BVL2 599 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 SELENOIQ9C0D9 397 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 NEK6Q9HC98 313 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 CHRAC1Q9NRG0 131 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 AIG1Q9NVV5 245 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 GNG12Q9UBI6 72 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 SEC14L3Q9UDX4 400 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 PRPF19Q9UMS4 504 aaKnown RBP3.72□□□□□ -1.81
PTCD3-205ENST00000464541 N6AMT1Q9Y5N5 214 aa3.72□□□□□ -1.81
PTCD3-205ENST00000464541 HEATR9A2RTY3 570 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 TCP11X1B4DZS4 312 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 TRAF3IP2O43734 574 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-205ENST00000464541 CTAG2O75638 210 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 IVLP07476 585 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 RGS4P49798 205 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 MAP3K7CLP57077 242 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 TRDNQ13061 729 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 CUL1Q13616 776 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 KCTD19Q17RG1 926 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-205ENST00000464541 BCL7AQ4VC05 210 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 PRAMEF5Q5TYX0 476 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 PRAMEF6Q5VXH4 476 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 TTC23Q5W5X9 447 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 Q6ZPB1 254 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-205ENST00000464541 BZW1Q7L1Q6 419 aaKnown RBP3.71□□□□□ -1.82
PTCD3-205ENST00000464541 GRAMD2AQ8IUY3 354 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 CEP112Q8N8E3 955 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 RAET1EQ8TD07 263 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 CHCHD10Q8WYQ3 142 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-205ENST00000464541 ISG20Q96AZ6 181 aaKnown RBP3.71□□□□□ -1.82
PTCD3-205ENST00000464541 CCNL2Q96S94 520 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-205ENST00000464541 C11orf70Q9BRQ4 267 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 SLC7A5P2Q9GIP4 190 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 RHBGQ9H310 441 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 SGK2Q9HBY8 427 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 CHRNA9Q9UGM1 479 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 ERVW-1Q9UQF0 538 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 RASD1Q9Y272 281 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 GMEB1Q9Y692 573 aa3.71□□□□□ -1.82
PTCD3-205ENST00000464541 IGLV3-16A0A075B6K0 115 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 IGHV3OR16-13A0A075B7E8 117 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 TRBV6-6A0A0A6YYG2 114 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 A0A0G2JRQ6 117 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 A0A1B0GTQ1 180 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 NKX2-6A6NCS4 301 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 GJE1A6NN92 205 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 PPIAL4DF5H284 164 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 GFYI3L273 518 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 YKT6O15498 198 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 DNAJB6O75190 326 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 SCGNO76038 276 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 CA1P00915 261 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-205ENST00000464541 PNMTP11086 282 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 MX1P20591 662 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 PPT1P50897 306 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 TGM3Q08188 693 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 SELPLGQ14242 412 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 TMEM225Q6GV28 225 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 CDR2LQ86X02 465 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-205ENST00000464541 LRRC75A-AS1Q8N1F1 130 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 ARIH2OSQ8N7S6 290 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 BPIFCQ8NFQ6 507 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 OR51S1Q8NGJ8 323 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 OR56B4Q8NH76 319 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 RDH5Q92781 318 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 FAM210BQ96KR6 192 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 C4orf36Q96KX1 117 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 TSNARE1Q96NA8 513 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 TMEM43Q9BTV4 400 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 TREM2Q9NZC2 230 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 NACAE9PAV3 2078 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 MAP3K19Q56UN5 1328 aa3.7□□□□□ -1.82
PTCD3-205ENST00000464541 HSBP1L1C9JCN9 74 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 G3V4G9 280 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 MAGEB4O15481 346 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-205ENST00000464541 ZSCAN12O43309 604 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 CDH16O75309 829 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 BCAS1O75363 584 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-205ENST00000464541 LGI1O95970 557 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 PRKACAP17612 351 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 PAX7P23759 505 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 FGF9P31371 208 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-205ENST00000464541 CA8P35219 290 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 LEPP41159 167 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 GRIA1P42261 906 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 ERICH5Q6P6B1 374 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 COMTD1Q86VU5 262 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 ECHDC2Q86YB7 292 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 TGIF2LXQ8IUE1 241 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 ZNF683Q8IZ20 524 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 TCAIMQ8N3R3 496 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 ANKFN1Q8N957 763 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 OR5L2Q8NGL0 311 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 LILRB4Q8NHJ6 448 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 FAM81AQ8TBF8 368 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 TSEN15Q8WW01 171 aaKnown RBP3.69□□□□□ -1.82
PTCD3-205ENST00000464541 EMG1Q92979 244 aaKnown RBP3.69□□□□□ -1.82
PTCD3-205ENST00000464541 IL22RA2Q969J5 263 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 C7orf34Q96L11 122 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms