RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 MED20Q9H944 212 aa10.59□□□□□ -0.71
TNRC6A-205ENST00000464539 APMAPQ9HDC9 416 aa10.59□□□□□ -0.71
TNRC6A-205ENST00000464539 COMMD9Q9P000 198 aa10.59□□□□□ -0.71
TNRC6A-205ENST00000464539 METTL1Q9UBP6 276 aaKnown RBP10.59□□□□□ -0.71
TNRC6A-205ENST00000464539 SH2B3Q9UQQ2 575 aa10.59□□□□□ -0.71
TNRC6A-205ENST00000464539 PLEKHA6Q9Y2H5 1048 aa10.59□□□□□ -0.71
TNRC6A-205ENST00000464539 IRAK3Q9Y616 596 aa10.59□□□□□ -0.71
TNRC6A-205ENST00000464539 ZC3H12DA2A288 527 aaKnown RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 PMS2P1A4D2B8 440 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 RIIAD1A6NNX1 92 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 PHYHO14832 338 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 SLC25A12O75746 678 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 POP4O95707 220 aaKnown RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 AKAIN1P0CW23 69 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 ADCYAP1P18509 176 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 TEAD1P28347 426 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 NTSP30990 170 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 RGS8P57771 180 aaPredicted RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 TAS2R38P59533 333 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 ST8SIA6P61647 398 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 SNRPEP62304 92 aaKnown RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 PRR5P85299 388 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 OC90Q02509 493 aaPredicted RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 Q3ZCU0 254 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 VWA2Q5GFL6 755 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 RPTNQ6XPR3 784 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 SLC16A13Q7RTY0 426 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 LILRB2Q8N423 598 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 ZNF561Q8N587 486 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 HMGB4Q8WW32 186 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 TMEM41AQ96HV5 264 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 LRFN5Q96NI6 719 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 VRK1Q99986 396 aaPredicted RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 ZNF471Q9BX82 626 aaPredicted RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 TEX101Q9BY14 249 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 CCDC86Q9H6F5 360 aaKnown RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 PELI2Q9HAT8 420 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 SMCO4Q9NRQ5 59 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 TMEM100Q9NV29 134 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 SIDT1Q9NXL6 827 aaKnown RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 B4GALT6Q9UBX8 382 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 MIOXQ9UGB7 285 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 HELZP42694 1942 aaKnown RBP10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 DENND4AQ7Z401 1863 aa10.58□□□□□ -0.72
TNRC6A-205ENST00000464539 TRBV2A0A0J9YWF9 115 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 A0A1W2PPK0 400 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 RNF222A6NCQ9 220 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 OR5H14A6NHG9 310 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 COLCA2A8K830 154 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 CDC42EP2O14613 210 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 XRCC3O43542 346 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 CDK2P24941 298 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 PMELP40967 661 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 STXBP1P61764 594 aaKnown RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 HABP2Q14520 560 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 EIF2S3LQ2VIR3 472 aaKnown RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 PCGF3Q3KNV8 242 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 PLPP4Q5VZY2 271 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 RAB12Q6IQ22 244 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 ENPP7Q6UWV6 458 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 NDUFAF7Q7L592 441 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 SZRD1Q7Z422 152 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 SYT9Q86SS6 491 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 RTN4RL1Q86UN2 441 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 CDK20Q8IZL9 346 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 POMGNT2Q8NAT1 580 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 PELI1Q96FA3 418 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 HCAR1Q9BXC0 346 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 ZDHHC5Q9C0B5 715 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 SLITRK2Q9H156 845 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 OR51V1Q9H2C8 321 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 MMP26Q9NRE1 261 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 SLC22A11Q9NSA0 550 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 ANKRD10Q9NXR5 420 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 OR5V1Q9UGF6 321 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 GPR55Q9Y2T6 319 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 PRG3Q9Y2Y8 225 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 MYO15AQ9UKN7 3530 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 A0A1B0GTI1 187 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 TMEM272A0A1B0GTI8 110 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 TMEM200CA6NKL6 621 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 ZNF729A6NN14 1252 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 PAPLNO95428 1278 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 ITGB2P05107 769 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 ZNF3P17036 446 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 HLA-GP17693 338 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 GATMP50440 423 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 SLC16A1P53985 500 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 STARD6P59095 220 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 MEF2AQ02078 507 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 NAAAQ02083 359 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 TSTA3Q13630 321 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 TEAD2Q15562 447 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 RSPO4Q2I0M5 234 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 C4orf46Q504U0 113 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 PRAMEF14Q5SWL7 426 aa10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 TMEM173Q86WV6 379 aaPredicted RBP10.57□□□□□ -0.72
TNRC6A-205ENST00000464539 VRK2Q86Y07 508 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms