RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 RPS6KB2Q9UBS0 482 aa12.54□□□□□ -0.4
SNRNP40-203ENST00000463988 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 LGI1O95970 557 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 ZNF43P17038 809 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 GTF2E2P29084 291 aaKnown RBP12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 RPS5P46782 204 aaKnown RBP12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 UBE2NP61088 152 aaKnown RBP12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 HOXC5Q00444 222 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 CDK6Q00534 326 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 SWI5Q1ZZU3 235 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 FAM69AQ5T7M9 428 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 FAM91A1Q658Y4 838 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 HMBOX1Q6NT76 420 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 HIPK1Q86Z02 1210 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 BHLHE22Q8NFJ8 381 aaPredicted RBP12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 LRRC8CQ8TDW0 803 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 SLC38A4Q969I6 547 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 OXGR1Q96P68 337 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 TNFRSF13CQ96RJ3 184 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 TMEM38AQ9H6F2 299 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 CORO2BQ9UQ03 480 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 MOKQ9UQ07 419 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 FBN1P35555 2871 aaKnown RBP12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 ARFGEF3Q5TH69 2177 aa12.53□□□□□ -0.4
SNRNP40-203ENST00000463988 RTTNQ86VV8 2226 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 TRAV36DV7A0A075B6V5 113 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 IGHV1-18A0A0C4DH31 117 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 PRORSD1PA6NEY8 169 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 AIM2O14862 343 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 SLC43A1O75387 559 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 UPK3AO75631 287 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 F12P00748 615 aaPredicted RBP12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 ATP4BP51164 291 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 LGALS3BPQ08380 585 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 MFSD13AQ14CX5 517 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 MST1LQ2TV78 715 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 ULK3Q6PHR2 472 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 H1FNTQ75WM6 255 aaPredicted RBP12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 LINGO2Q7L985 606 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 ZNF525Q8N782 197 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 ADPRHL1Q8NDY3 354 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 OR6S1Q8NH40 331 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 C10orf105Q8TEF2 133 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 FAM168AQ92567 244 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 PROX1Q92786 737 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 TAAR8Q969N4 342 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 RSPO3Q9BXY4 272 aaPredicted RBP12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 EVA1AQ9H8M9 152 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 SLCO1B3Q9NPD5 702 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 CCDC167Q9P0B6 97 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 SLAMF8Q9P0V8 285 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 B3GAT1Q9P2W7 334 aa12.52□□□□□ -0.41
SNRNP40-203ENST00000463988 A8MV72 311 aaPredicted RBP12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 NR5A2O00482 541 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 PDE5AO76074 875 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 IGLV1-44P01699 117 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 CRYAAP02489 173 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 GPX2P18283 190 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 SLC6A2P23975 617 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 HTR2AP28223 471 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 AQP5P55064 265 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 CLDN17P56750 224 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 VLDLRP98155 873 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 ROR2Q01974 943 aaKnown RBP12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 TMEM249Q2WGJ8 235 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 ALG10BQ5I7T1 473 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 PAGE3Q5JUK9 113 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 KDM8Q8N371 416 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 SPATA3Q8NHX4 192 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 STON2Q8WXE9 905 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 SLC47A1Q96FL8 570 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 EBF4Q9BQW3 602 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 NELFAQ9H3P2 528 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 VAPAQ9P0L0 249 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 TESQ9UGI8 421 aaKnown RBP12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 FBXO9Q9UK97 447 aaPredicted RBP12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 CORINQ9Y5Q5 1042 aa12.51□□□□□ -0.41
SNRNP40-203ENST00000463988 FBN3Q75N90 2809 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 A0A087WUJ7 227 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 EVPLLA8MZ36 301 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 M0R082 166 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 GPRIN2O60269 458 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 TPST1O60507 370 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 SERPINB7O75635 380 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 IFNA2P01563 188 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 SERPINF1P36955 418 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms