RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 FKRPQ9H9S5 495 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RHOFQ9HBH0 211 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 LPAR2Q9HBW0 351 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SEPSECSQ9HD40 501 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GPR173Q9NS66 373 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MAN2C1Q9NTJ4 1040 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NLE1Q9NVX2 485 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RHCGQ9UBD6 479 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF230Q9UIE0 474 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 KCNG2Q9UJ96 466 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 DKKL1Q9UK85 242 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 PPT2Q9UMR5 302 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 A4GNTQ9UNA3 340 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ST3GAL5Q9UNP4 418 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RASD1Q9Y272 281 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TNFSF13BQ9Y275 285 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 URGCP-MRPS24S4R325 110 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 PCNTO95613 3336 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 BLACEA4D250 179 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 METTL12A8MUP2 240 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 MCIDASD6RGH6 385 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 FAM227AF5H4B4 570 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 K7ERQ8 282 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 CCL22O00626 93 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 OR2J2O76002 312 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 WISP1O95388 367 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 MMP3P08254 477 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 METTL15P1P0C7V9 234 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 HSD3B1P14060 373 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TYRP14679 529 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 ST6GAL1P15907 406 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 CPEP16870 476 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 PSMB1P20618 241 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TUBG1P23258 451 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 RBMS1P29558 406 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 CEACAM6P40199 344 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 CD96P40200 585 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 AGTR2P50052 363 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TNFSF10P50591 281 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 DLX5P56178 289 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 OR10A3P58181 314 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 RPS8P62241 208 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 ITKQ08881 620 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 MAP4K2Q12851 820 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF234Q14588 700 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TAF13Q15543 124 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 PLK5Q496M5 336 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 FBXW9Q5XUX1 488 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF774Q6NX45 483 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 WDR73Q6P4I2 378 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 PRSS55Q6UWB4 352 aaPredicted RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 GLDNQ6ZMI3 551 aaPredicted RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 SLC24A5Q71RS6 500 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 WDR53Q7Z5U6 358 aaPredicted RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TCEANCQ8N8B7 351 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 ADPRHL1Q8NDY3 354 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 BEND2Q8NDZ0 799 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 FIBINQ8TAL6 211 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 CD300LFQ8TDQ1 290 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TRAPPC12Q8WVT3 735 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TMED6Q8WW62 240 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 NT5C3BQ969T7 300 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 WDR92Q96MX6 357 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 CNN2Q99439 309 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF670Q9BS34 389 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 DPY30Q9C005 99 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 SELENOIQ9C0D9 397 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 ST6GALNAC4Q9H4F1 302 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 RGCCQ9H4X1 137 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 WDCPQ9H6R7 721 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 EIF2B3Q9NR50 452 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 SLC2A4RGQ9NR83 387 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TUBG2Q9NRH3 451 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 PTGFRNQ9P2B2 879 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 PRODH2Q9UF12 536 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 RBM7Q9Y580 266 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 PCDHB1Q9Y5F3 818 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 MYO18AQ92614 2054 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 A0A1B0GUH1 482 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 GXYLT2A0PJZ3 443 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TRAPPC13A5PLN9 417 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 C2CD4BA6NLJ0 364 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 FAM220BPB1ANY3 271 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 LRRN3E7EW58 273 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 RNASEK-C17orf49H0YIS7 233 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 J3KTA2 159 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 M0QZK8 103 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 MASP2O00187 686 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 TLR4O00206 839 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 GABRPO00591 440 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 SCDO00767 359 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 EIF4E2O60573 245 aaKnown RBP3.31□□□□□ -1.88
COL8A1-205ENST00000463753 PRAF2O60831 178 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 NDUFS3O75489 264 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 SC5DO75845 299 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 IRF2P14316 349 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 INSRRP14616 1297 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 LAG3P18627 525 aa3.31□□□□□ -1.88
COL8A1-205ENST00000463753 DLSTP36957 453 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms