RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BTBD10Q9BSF8 475 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 TRIM45Q9H8W5 580 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 EFCAB1Q9HAE3 211 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 CLK4Q9HAZ1 481 aaKnown RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 DDX18Q9NVP1 670 aaKnown RBP3.25□□□□□ -1.89
SCFD1-204ENST00000463622 GIN1Q9NXP7 522 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 BCAP29Q9UHQ4 241 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 SPACA6W5XKT8 324 aa3.25□□□□□ -1.89
SCFD1-204ENST00000463622 HIVEP2P31629 2446 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 CACNA1CQ13936 2221 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 A0A0G2JMM0 328 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 A0A1W2PPB8 328 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 A0A1W2PRS3 328 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 KIR3DP1A8MWS1 328 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 WWP2O00308 870 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SYT5O00445 386 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 CLDN4O14493 209 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 TPST1O60507 370 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 GUCY1B2O75343 617 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 NEURL1O76050 574 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ANP32DO95626 131 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 BCHEP06276 602 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SP1P08047 785 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 TFPTP0C1Z6 253 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ABOP16442 354 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 TNNI3P19429 210 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 MATN1P21941 496 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 DUSP1P28562 367 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 MPIP34949 423 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 CHI3L1P36222 383 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 RPL3P39023 403 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 CDKN2AP42771 156 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 CRATP43155 626 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SOX2P48431 317 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 GTF3C1Q12789 2109 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 STX5Q13190 355 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 MYBPHQ13203 477 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 BTBD16Q32M84 506 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 MIDNQ504T8 468 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SHEQ5VZ18 495 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SPINK14Q6IE38 97 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SLC25A25Q6KCM7 469 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 HEPHL1Q6MZM0 1159 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 NIPAL1Q6NVV3 410 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 CDC73Q6P1J9 531 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ARSKQ6UWY0 536 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ANGPTL8Q6UXH0 198 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 APOOLQ6UXV4 268 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 FRRS1Q6ZNA5 592 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 LACC1Q8IV20 430 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 CCDC71Q8IV32 467 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 RNF152Q8N8N0 203 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 B3GNT7Q8NFL0 401 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 GPR32P1Q8NGA4 272 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 OR8J3Q8NGG0 315 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SFXN5Q8TD22 340 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ELP5Q8TE02 316 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SLC38A5Q8WUX1 472 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 TAMM41Q96BW9 452 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ROPN1LQ96C74 230 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 MSI2Q96DH6 328 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 RMND5BQ96G75 393 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM19Q96HH6 336 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF354BQ96LW1 612 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 MS4A4EQ96PG1 132 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 GAL3ST4Q96RP7 486 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 PRPF18Q99633 342 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 LMF2Q9BU23 707 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 TUBB6Q9BUF5 446 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 THUMPD3Q9BV44 507 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 HES7Q9BYE0 225 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 WWTR1Q9GZV5 400 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 SLC38A1Q9H2H9 487 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 HIPK2Q9H2X6 1198 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 RMND5AQ9H871 391 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 PLEKHF2Q9H8W4 249 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ATAD3AQ9NVI7 634 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 ADA2Q9NZK5 511 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 TEKT2Q9UIF3 430 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 PPIEQ9UNP9 301 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 MRPS33Q9Y291 106 aaKnown RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 GMEB1Q9Y692 573 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 V9GYQ6 96 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 VPS13CQ709C8 3753 aa3.24□□□□□ -1.89
SCFD1-204ENST00000463622 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-204ENST00000463622 A0A087WV62 115 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PINLYPA6NC86 204 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 A6NNC1 897 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 FAM220BPB1ANY3 271 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ARPC2O15144 300 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GYG2O15488 501 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 TPST2O60704 377 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 UGT2B11O75310 529 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 KCNK2O95069 426 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 NKX2-2O95096 273 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 H6PDO95479 791 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MT-ND1P03886 318 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 RAF1P04049 648 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 NQO1P15559 274 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GGT1P19440 569 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms