RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 IL17RELQ6ZVW7 336 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 SLC46A3Q7Z3Q1 461 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 GPAT4Q86UL3 456 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 ZNF440Q8IYI8 595 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 TRIML2Q8N7C3 387 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 C3orf49Q96BT1 292 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 SPDL1Q96EA4 605 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 ITCHQ96J02 903 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 VRK1Q99986 396 aaPredicted RBP17.23■□□□□ 0.35
VARS-221ENST00000463184 CA10Q9NS85 328 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 FBXO9Q9UK97 447 aaPredicted RBP17.23■□□□□ 0.35
VARS-221ENST00000463184 IGHV4-61A0A0C4DH41 118 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 NR5A2O00482 541 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 RFXANKO14593 260 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 DBIP07108 87 aaKnown RBP17.22■□□□□ 0.35
VARS-221ENST00000463184 CARTPTQ16568 116 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 C3orf36Q3SXR2 165 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 MRPL2Q5T653 305 aaKnown RBP17.22■□□□□ 0.35
VARS-221ENST00000463184 OR1K1Q8NGR3 316 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 TSPEARQ8WU66 669 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 TAPBPLQ9BX59 468 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 SLC52A3Q9NQ40 469 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 SAR1AQ9NR31 198 aa17.22■□□□□ 0.35
VARS-221ENST00000463184 OR6C65A6NJZ3 312 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 ZNF587BE7ETH6 402 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 HAX1O00165 279 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 CCDC22O60826 627 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 VAMP5O95183 116 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 TGFAP01135 160 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 C1QCP02747 245 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 NR2F1P10589 423 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 ZNF23P17027 643 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 UBE2NP61088 152 aaKnown RBP17.21■□□□□ 0.35
VARS-221ENST00000463184 EFNB3Q15768 340 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 LIPNQ5VXI9 398 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 ANKRD16Q6P6B7 361 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 ZNF621Q6ZSS3 439 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 PEX5LQ8IYB4 626 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 ANKS4BQ8N8V4 417 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 MAGEE2Q8TD90 523 aaPredicted RBP17.21■□□□□ 0.35
VARS-221ENST00000463184 GTF2H4Q92759 462 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 RAB1BQ9H0U4 201 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 PLK3Q9H4B4 646 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 MOV10Q9HCE1 1003 aaKnown RBP17.21■□□□□ 0.35
VARS-221ENST00000463184 CRNNQ9UBG3 495 aaPredicted RBP17.21■□□□□ 0.35
VARS-221ENST00000463184 NBEAL1Q6ZS30 2694 aa17.21■□□□□ 0.35
VARS-221ENST00000463184 ARPC4-TTLL3A0A0A6YYG9 625 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 ANP32DO95626 131 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 LGI1O95970 557 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 OR4A8P0C604 315 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 ZCCHC18P0CG32 403 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 HOXB1P14653 301 aaPredicted RBP17.2■□□□□ 0.34
VARS-221ENST00000463184 CDKN2CP42773 168 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 PPOXP50336 477 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 P2RY4P51582 365 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 SRSF2Q01130 221 aaKnown RBP17.2■□□□□ 0.34
VARS-221ENST00000463184 NAAAQ02083 359 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 ADIPOQQ15848 244 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 CREB3L2Q70SY1 520 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 PIGWQ7Z7B1 504 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 LSRQ86X29 649 aaPredicted RBP17.2■□□□□ 0.34
VARS-221ENST00000463184 OR4F15Q8NGB8 312 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 BCL2L2Q92843 193 aaPredicted RBP17.2■□□□□ 0.34
VARS-221ENST00000463184 BPESC1Q9GZL8 116 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 ADPRHL2Q9NX46 363 aa17.2■□□□□ 0.34
VARS-221ENST00000463184 ANK2Q01484 3957 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 CDHR4A6H8M9 788 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 A8MVM7 634 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 SLC22A2O15244 555 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 SHOX2O60902 331 aaPredicted RBP17.19■□□□□ 0.34
VARS-221ENST00000463184 GSNP06396 782 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 SELENOPP49908 381 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 IDH3GP51553 393 aaPredicted RBP17.19■□□□□ 0.34
VARS-221ENST00000463184 COPZ1P61923 177 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 KLF10Q13118 480 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 C6orf10Q5SRN2 563 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 WBP2NLQ6ICG8 309 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 SLC2A7Q6PXP3 512 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 FAM169BQ8N8A8 192 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 RLIMQ9NVW2 624 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 LEF1Q9UJU2 399 aaPredicted RBP17.19■□□□□ 0.34
VARS-221ENST00000463184 NDUFAF1Q9Y375 327 aa17.19■□□□□ 0.34
VARS-221ENST00000463184 A0A096LPI6 279 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 VSTM5A8MXK1 200 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 STAMBPO95630 424 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 IGLV1-44P01699 117 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 CECR9P0C854 216 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 GKN3PP0CG01 181 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 ACAA2P42765 397 aaKnown RBP17.18■□□□□ 0.34
VARS-221ENST00000463184 BNIP2Q12982 314 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 MAPRE2Q15555 327 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 LIN52Q52LA3 116 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 COX20Q5RI15 118 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 VHLLQ6RSH7 139 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 CADM2Q8N3J6 435 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 NUP37Q8NFH4 326 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 OR52P1PQ8NH57 321 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 ALKBH3Q96Q83 286 aaPredicted RBP17.18■□□□□ 0.34
VARS-221ENST00000463184 CCT8L2Q96SF2 557 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 LINC00470Q9BZP3 86 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms