RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 BEST3Q8N1M1 668 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 LRRC25Q8N386 305 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 TMEM178AQ8NBL3 297 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 FAM98AQ8NCA5 519 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 MORN4Q8NDC4 146 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 B3GNT7Q8NFL0 401 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 OR14A16Q8NHC5 309 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 FBXO30Q8TB52 745 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 IPCEF1Q8WWN9 437 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 LRTOMTQ8WZ04 291 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 DAZLQ92904 295 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 MARC2Q969Z3 335 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PPWD1Q96BP3 646 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CNRIP1Q96F85 164 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SCMH1Q96GD3 660 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 IMMP1LQ96LU5 166 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF354BQ96LW1 612 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PIP5K1AQ99755 562 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 APOL4Q9BPW4 351 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 UTP23Q9BRU9 249 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CNPPD1Q9BV87 410 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 C19orf24Q9BVV8 132 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF416Q9BWM5 594 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CDADC1Q9BWV3 514 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 DPY30Q9C005 99 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 OR8D2Q9GZM6 311 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 GHITMQ9H3K2 345 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 REEP4Q9H6H4 257 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 NIPAL2Q9H841 368 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 ASIC5Q9NY37 505 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 ABCD2Q9UBJ2 740 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 COPS7AQ9UBW8 275 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CES1P1Q9UKY3 287 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CLDN16Q9Y5I7 305 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 GMPPBQ9Y5P6 360 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 MGAM2Q2M2H8 2515 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 DSCAMO60469 2012 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 HEATR5AQ86XA9 2040 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 TRBV11-1A0A0K0K1C0 115 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 A0A1W2PPW3 197 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 A0A1W2PS29 197 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 GABRR3A8MPY1 467 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 SOCS2O14508 198 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 FRS3O43559 492 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CDC40O60508 579 aaKnown RBP eCLIP5.42□□□□□ -1.543e-6■■■□□ 17.2
SMARCC1-204ENST00000462198 PDE9AO76083 593 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CNOT4O95628 575 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 IFNA4P05014 189 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ATP1B1P05026 303 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ALDOCP09972 364 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 SMIM6P0DI80 62 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 IL7P13232 177 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 HSD17B1P14061 328 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ACVR2AP27037 513 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 NTSP30990 170 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 GALNSP34059 522 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 SOX6P35712 828 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MRPL19P49406 292 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 RAB13P51153 203 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 NCBP2P52298 156 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 PPP5CP53041 499 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC16A1P53985 500 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ADARB1P78563 741 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 TEKQ02763 1124 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 KRTAP1-1Q07627 177 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MERTKQ12866 999 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CNN3Q15417 329 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 NRF1Q16656 503 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 DGUOKQ16854 277 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CYP27C1Q4G0S4 372 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CYBRD1Q53TN4 286 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 MTX3Q5HYI7 312 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ACER2Q5QJU3 275 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ATAD3CQ5T2N8 411 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CPTPQ5TA50 214 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 LCN8Q6JVE9 175 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC25A25Q6KCM7 469 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 HEPHL1Q6MZM0 1159 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 C3orf33Q6P1S2 294 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 BHLHB9Q6PI77 547 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 TTC33Q6PID6 262 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF773Q6PK81 442 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF782Q6ZMW2 699 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 DGAT2L6Q6ZPD8 337 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ZBTB49Q6ZSB9 765 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ESPNLQ6ZVH7 1005 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 COMTD1Q86VU5 262 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 EPHX4Q8IUS5 362 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 GPALPP1Q8IXQ4 340 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 LGI4Q8N135 537 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 CLEC4FQ8N1N0 589 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 ARMC10Q8N2F6 343 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 KRTCAP2Q8N6L1 136 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 OR7A2PQ8NGA2 310 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 OR4D10Q8NGI6 311 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 OR5M3Q8NGP4 307 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 OR9A2Q8NGT5 310 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 OR6F1Q8NGZ6 308 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 OR52N1Q8NH53 320 aa5.42□□□□□ -1.54
SMARCC1-204ENST00000462198 M1APQ8TC57 530 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms