RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 FAM69AQ5T7M9 428 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 INTS11Q5TA45 600 aaKnown RBP7.79□□□□□ -1.16
LDB1-203ENST00000461873 FAM91A1Q658Y4 838 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 CREB3L2Q70SY1 520 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 HIST3H2AQ7L7L0 130 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 MAVSQ7Z434 540 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 DHDDSQ86SQ9 333 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 KRTAP1-3Q8IUG1 177 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 UEVLDQ8IX04 471 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 CIARTQ8N365 385 aaPredicted RBP7.79□□□□□ -1.16
LDB1-203ENST00000461873 C11orf65Q8NCR3 313 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 PIK3C3Q8NEB9 887 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 RASSF5Q8WWW0 418 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 HIST1H2ACQ93077 130 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 C3orf49Q96BT1 292 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 OXGR1Q96P68 337 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 SH3GL1Q99961 368 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 EBF4Q9BQW3 602 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 TRAF4Q9BUZ4 470 aaPredicted RBP7.79□□□□□ -1.16
LDB1-203ENST00000461873 REG4Q9BYZ8 158 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 SLC6A13Q9NSD5 602 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 FBXO9Q9UK97 447 aaPredicted RBP7.79□□□□□ -1.16
LDB1-203ENST00000461873 B3GALT5Q9Y2C3 310 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 RAI1Q7Z5J4 1906 aaPredicted RBP7.79□□□□□ -1.16
LDB1-203ENST00000461873 USF3Q68DE3 2245 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 ROS1P08922 2347 aa7.79□□□□□ -1.16
LDB1-203ENST00000461873 SHISA9B4DS77 424 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 NDUFAB1O14561 156 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ENTPD5O75356 428 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 FAM107AO95990 144 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 IFNA2P01563 188 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ITGA5P08648 1049 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ARAFP10398 606 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 PRG2P13727 222 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 HOXB4P17483 251 aaPredicted RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 CBLP22681 906 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 EDNRAP25101 427 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 IFNA8P32881 189 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ACVR1BP36896 505 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 MRPL19P49406 292 aaKnown RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 SELENOPP49908 381 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 MVDP53602 400 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ROR2Q01974 943 aaKnown RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 RBBP4Q09028 425 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 PMS2P3Q13401 168 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 CARTPTQ16568 116 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 PGGHGQ32M88 737 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 LRIF1Q5T3J3 769 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ANKRD16Q6P6B7 361 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 DHRS4L2Q6PKH6 230 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 H1FNTQ75WM6 255 aaPredicted RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 PIGWQ7Z7B1 504 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ATG4DQ86TL0 474 aaPredicted RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 CCDC36Q8IYA8 594 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 OR6N1Q8NGY5 312 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 LILRB1Q8NHL6 650 aaPredicted RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 NANOS1Q8WY41 292 aaKnown RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 FBXO17Q96EF6 278 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ZNF385AQ96PM9 386 aaKnown RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 ALKBH3Q96Q83 286 aaPredicted RBP7.78□□□□□ -1.16
LDB1-203ENST00000461873 TMEM38AQ9H6F2 299 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 NPAP1Q9NZP6 1156 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 MOKQ9UQ07 419 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 POFUT2Q9Y2G5 429 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 SPEF1Q9Y4P9 236 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 CORINQ9Y5Q5 1042 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 NOX1Q9Y5S8 564 aa7.78□□□□□ -1.16
LDB1-203ENST00000461873 ACANP16112 2415 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 A0A096LPE4 126 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 A0A1B0GWA3 101 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 A0A1W2PPZ6 126 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 INAFM1C9JVW0 142 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 E7EQL1 145 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 OVOL3O00110 214 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 RRP9O43818 475 aaKnown RBP7.77□□□□□ -1.17
LDB1-203ENST00000461873 SNX3O60493 162 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 SERPINI2O75830 405 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 LGI1O95970 557 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 IFNA14P01570 189 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 UMPSP11172 480 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 BMP2P12643 396 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 PTNP21246 168 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 GRPRP30550 384 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 GABPB1Q06547 395 aaPredicted RBP7.77□□□□□ -1.17
LDB1-203ENST00000461873 CYLC2Q14093 348 aaPredicted RBP7.77□□□□□ -1.17
LDB1-203ENST00000461873 MAPRE2Q15555 327 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 OR1Q1Q15612 314 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 TBRG1Q3YBR2 411 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 HIKESHIQ53FT3 197 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 PAGE3Q5JUK9 113 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 TTC33Q6PID6 262 aaPredicted RBP7.77□□□□□ -1.17
LDB1-203ENST00000461873 VHLLQ6RSH7 139 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 SLC46A3Q7Z3Q1 461 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 SPATA21Q7Z572 469 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 PATL1Q86TB9 770 aaKnown RBP7.77□□□□□ -1.17
LDB1-203ENST00000461873 DTX2Q86UW9 622 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 KDM8Q8N371 416 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 LSMEM1Q8N8F7 131 aa7.77□□□□□ -1.17
LDB1-203ENST00000461873 SCAIQ8N9R8 606 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms