RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 NTN4Q9HB63 628 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 CACYBPQ9HB71 228 aaKnown RBP5.05□□□□□ -1.6
PTPN12-209ENST00000460731 TMEM27Q9HBJ8 222 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 FANCFQ9NPI8 374 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 SPRR3Q9UBC9 169 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 CHRNA9Q9UGM1 479 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 RIMS3Q9UJD0 308 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 OAZ3Q9UMX2 235 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 HDGFL3Q9Y3E1 203 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 DMRT1Q9Y5R6 373 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 MED12LQ86YW9 2145 aa5.05□□□□□ -1.6
PTPN12-209ENST00000460731 PHF3Q92576 2039 aaKnown RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 CACNA1CQ13936 2221 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 USP9YO00507 2555 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TMED7-TICAM2A0A0A6YYA0 188 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 A0A0J9YW62 118 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ARRDC5A6NEK1 342 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 FAM166BA8MTA8 275 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 A8MVM7 634 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 NPIPA5E9PKD4 350 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 BCKDKO14874 412 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TFECO14948 347 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TBX1O43435 398 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 KLF4O43474 513 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TRAPPC6AO75865 159 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 PMS2P2O95744 297 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ZNF682O95780 498 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 STSP08842 583 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 NAT2P11245 290 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TNFRSF1BP20333 461 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 IL11P20809 199 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 RYKP34925 604 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 PTGER4P35408 488 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 P2RY4P51582 365 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SUCLG1P53597 346 aaKnown RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 CTBP2P56545 445 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SMIM11AP58511 58 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 PLGLB1Q02325 96 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 COL10A1Q03692 680 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 CHRNB3Q05901 458 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ST3GAL3Q11203 375 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 FOXF1Q12946 379 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 FHL1Q13642 323 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 KPNB1Q14974 876 aaKnown RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 GXYLT1Q4G148 440 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 PRR30Q53SZ7 412 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SYT14P1Q58G82 188 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ALG10BQ5I7T1 473 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 COLEC12Q5KU26 742 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 C1orf146Q5VVC0 180 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ZFP1Q6P2D0 407 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TMPPEQ6ZT21 453 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ESPNLQ6ZVH7 1005 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TMPRSS11FQ6ZWK6 438 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ZNF627Q7L945 461 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 MRGPRGQ86SM5 289 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ZDHHC21Q8IVQ6 265 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 OR14L1PQ8NHC6 308 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 MFSD8Q8NHS3 518 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 FAM57AQ8TBR7 257 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 CPT1CQ8TCG5 803 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SLC7A13Q8TCU3 470 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ACOT11Q8WXI4 607 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ABTB1Q969K4 478 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SARAFQ96BY9 339 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 NRBF2Q96F24 287 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 LRGUKQ96M69 825 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 JSRP1Q96MG2 331 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 DOCK7Q96N67 2140 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 PTDSS2Q9BVG9 487 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SLC6A15Q9H2J7 730 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 COQ10BQ9H8M1 238 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 CALHM2Q9HA72 323 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 MEPEQ9NQ76 525 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 CTPS2Q9NRF8 586 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SERINC1Q9NRX5 453 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 PAQR5Q9NXK6 330 aaPredicted RBP5.04□□□□□ -1.6
PTPN12-209ENST00000460731 SLC13A4Q9UKG4 626 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 NPIPA1Q9UND3 350 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 VDAC3Q9Y277 283 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 TMED7Q9Y3B3 224 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 LIPGQ9Y5X9 500 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 ADGRG4Q8IZF6 3080 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 FREM1Q5H8C1 2179 aa5.04□□□□□ -1.6
PTPN12-209ENST00000460731 NCOA6Q14686 2063 aaPredicted RBP5.03□□□□□ -1.6
PTPN12-209ENST00000460731 A0A087WUU8 490 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 A0A1B0GTH9 108 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 TMEM72A0PK05 275 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 SH3PXD2BA1X283 911 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 CD8B2A6NJW9 211 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 LIPT2A6NK58 231 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 GJE1A6NN92 205 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 J3KTA2 159 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 HNRNPRO43390 633 aaKnown RBP5.03□□□□□ -1.6
PTPN12-209ENST00000460731 OR2T1O43869 369 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 WDR1O75083 606 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 FKBP6O75344 327 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 ENTPD5O75356 428 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 PTP4A3O75365 173 aa5.03□□□□□ -1.6
PTPN12-209ENST00000460731 CIB2O75838 187 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms