RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 CFAP73A6NFT4 308 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 LIPT2A6NK58 231 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 PLIN3O60664 434 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CDC14BO60729 498 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 SLC43A1O75387 559 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 UPK3AO75631 287 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CPSF4O95639 269 aaKnown RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 IGKV3-15P01624 115 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 IGLV1-44P01699 117 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 HPXP02790 462 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 ABHD2P08910 425 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 NAT2P11245 290 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CBR1P16152 277 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 IL7RP16871 459 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 ZNF43P17038 809 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 NCF2P19878 526 aaPredicted RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 RAD52P43351 418 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 SMCPP49901 116 aaPredicted RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 MAP2K6P52564 334 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CLDN17P56750 224 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 RPS23P62266 143 aaKnown RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 ARF1P84077 181 aaKnown RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 MVKQ03426 396 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 HGFACQ04756 655 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 C1DQ13901 141 aaKnown RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 MAD2L1BPQ15013 274 aaPredicted RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 ELFN2Q5R3F8 820 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 AVPI1Q5T686 147 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 ACSM5Q6NUN0 579 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CREB3L2Q70SY1 520 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 TRMT10CQ7L0Y3 403 aaKnown RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 MDP1Q86V88 176 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 ANKRD46Q86W74 232 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CARM1Q86X55 608 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 C10orf107Q8IVU9 208 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 IFT20Q8IY31 132 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 VPS37AQ8NEZ2 397 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 IL17RDQ8NFM7 739 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 KIF18AQ8NI77 898 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 MZB1Q8WU39 189 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 SNX33Q8WV41 574 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 OIT3Q8WWZ8 545 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CNOT9Q92600 299 aaKnown RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 BCL2L2Q92843 193 aaPredicted RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 SLC25A36Q96CQ1 311 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 TUBGCP3Q96CW5 907 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 DUX5Q96PT3 197 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 TXLNGYQ9BZA5 131 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 MRPL37Q9BZE1 423 aaKnown RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 NTN4Q9HB63 628 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 POLE3Q9NRF9 147 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 CRNNQ9UBG3 495 aaPredicted RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 MARCOQ9UEW3 520 aaPredicted RBP6.8□□□□□ -1.32
HPS4-207ENST00000459918 DUSP13Q9UII6 198 aa6.8□□□□□ -1.32
HPS4-207ENST00000459918 M0R3G1 203 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 WNT9BO14905 357 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 AKAP8O43823 692 aaKnown RBP6.79□□□□□ -1.32
HPS4-207ENST00000459918 VAMP5O95183 116 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 AHSA1O95433 338 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 RAB36O95755 333 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 SHBGP04278 402 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 CHRNGP07510 517 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 COL8A2P25067 703 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 PTDSS1P48651 473 aaKnown RBP6.79□□□□□ -1.32
HPS4-207ENST00000459918 ANXA11P50995 505 aaKnown RBP6.79□□□□□ -1.32
HPS4-207ENST00000459918 MMP16P51512 607 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 ARFIP2P53365 341 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 SELENOVP59797 346 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 UBA52P62987 128 aaKnown RBP6.79□□□□□ -1.32
HPS4-207ENST00000459918 PIGFQ07326 219 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 ZP4Q12836 540 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 BNIP2Q12982 314 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 MAD2L1Q13257 205 aaPredicted RBP6.79□□□□□ -1.32
HPS4-207ENST00000459918 PDCD2Q16342 344 aaPredicted RBP6.79□□□□□ -1.32
HPS4-207ENST00000459918 GSG1Q2KHT4 349 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 CEACAM16Q2WEN9 425 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 ATG16L1Q676U5 607 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 OR4F3Q6IEY1 312 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 FRRS1Q6ZNA5 592 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 ZCCHC23Q6ZST2 131 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 C1QL2Q7Z5L3 287 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 CMIPQ8IY22 773 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 CNPY4Q8N129 248 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 ZIC4Q8N9L1 334 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 ICA1LQ8NDH6 482 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 MAGEE2Q8TD90 523 aaPredicted RBP6.79□□□□□ -1.32
HPS4-207ENST00000459918 COQ8BQ96D53 544 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 C7orf69Q9H7B7 122 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 ZNF665Q9H7R5 613 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 GPR160Q9UJ42 338 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 RASD1Q9Y272 281 aa6.79□□□□□ -1.32
HPS4-207ENST00000459918 TMEM129A0AVI4 362 aa6.78□□□□□ -1.32
HPS4-207ENST00000459918 ISPDA4D126 451 aa6.78□□□□□ -1.32
HPS4-207ENST00000459918 A8MVM7 634 aa6.78□□□□□ -1.32
HPS4-207ENST00000459918 J3QLI3 93 aa6.78□□□□□ -1.32
HPS4-207ENST00000459918 FRS3O43559 492 aa6.78□□□□□ -1.32
HPS4-207ENST00000459918 TRIM13O60858 407 aa6.78□□□□□ -1.32
HPS4-207ENST00000459918 ZNF432O94892 652 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms