RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 IGF2P01344 180 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 IGHV3-9P01782 118 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 TNFRSF1BP20333 461 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 COX5AP20674 150 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 CALB2P22676 271 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 CBLP22681 906 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 NTF4P34130 210 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 PIN1Q13526 163 aaPredicted RBP14.26□□□□□ -0.13
CD28-203ENST00000458610 TIMM23BQ5SRD1 257 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.26□□□□□ -0.13
CD28-203ENST00000458610 CDH24Q86UP0 819 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 EPHX4Q8IUS5 362 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 ARHGAP24Q8N264 748 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 ZNF433Q8N7K0 673 aaPredicted RBP14.26□□□□□ -0.13
CD28-203ENST00000458610 OR5J2Q8NH18 312 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 PIK3IP1Q96FE7 263 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 PRRC1Q96M27 445 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 ZNF426Q9BUY5 554 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 FNDC11Q9BVV2 318 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 GORASP2Q9H8Y8 452 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 NANSQ9NR45 359 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 ZNF229Q9UJW7 825 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 MED31Q9Y3C7 131 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 FAM32AQ9Y421 112 aaKnown RBP14.26□□□□□ -0.13
CD28-203ENST00000458610 NOX1Q9Y5S8 564 aa14.26□□□□□ -0.13
CD28-203ENST00000458610 CENPEQ02224 2701 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 SLC43A1O75387 559 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 CH25HO95992 272 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 MT-ND1P03886 318 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 THY1P04216 161 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 THBDP07204 575 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 UMPSP11172 480 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 NCK1P16333 377 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 AHCYP23526 432 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 PAX7P23759 505 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 MPGP29372 298 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 DNAJA1P31689 397 aaKnown RBP14.25□□□□□ -0.13
CD28-203ENST00000458610 CLDN17P56750 224 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 SLC25A3Q00325 362 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 LTBQ06643 244 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 PUDPQ08623 228 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 TAB1Q15750 504 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 ZNF74Q16587 644 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 TSPO2Q5TGU0 170 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 NIPAL3Q6P499 406 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 PXKQ7Z7A4 578 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 DEFB107AQ8IZN7 70 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 KDM8Q8N371 416 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 C1orf162Q8NEQ5 155 aaPredicted RBP14.25□□□□□ -0.13
CD28-203ENST00000458610 ANKK1Q8NFD2 765 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 BCAS4Q8TDM0 211 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 TMEM239Q8WW34 195 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 NINJ1Q92982 152 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 HSH2DQ96JZ2 352 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 PRSS27Q9BQR3 290 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 LINC00470Q9BZP3 86 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 ESRP2Q9H6T0 727 aaKnown RBP14.25□□□□□ -0.13
CD28-203ENST00000458610 SLC7A10Q9NS82 523 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 DCAF13Q9NV06 445 aaKnown RBP14.25□□□□□ -0.13
CD28-203ENST00000458610 GMPR2Q9P2T1 348 aaKnown RBP14.25□□□□□ -0.13
CD28-203ENST00000458610 EGFL7Q9UHF1 273 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 MPDZO75970 2070 aa14.25□□□□□ -0.13
CD28-203ENST00000458610 OR5H1A6NKK0 313 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 ZNF726A6NNF4 738 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 DEFB108AA8MXU0 73 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 ZNF587BE7ETH6 402 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 MS4A18H0YCH9 400 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 PLPP3O14495 311 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 ADORA3P0DMS8 318 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 ITGA2P17301 1181 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 DNASE1P24855 282 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 EDNRAP25101 427 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 HOXC12P31275 282 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 TRAM2Q15035 370 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 PPA1Q15181 289 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 TSC22D1Q15714 1073 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 STK11Q15831 433 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 MS4A18Q3C1V0 323 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 ALKBH2Q6NS38 261 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 WDR88Q6ZMY6 472 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 VTCN1Q7Z7D3 282 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 C17orf78Q8N4C9 275 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 RNF148Q8N7C7 305 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 PIK3C3Q8NEB9 887 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 SGTBQ96EQ0 304 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 MUS81Q96NY9 551 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 MOGAT1Q96PD6 335 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 AMBRA1Q9C0C7 1298 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 B3GAT1Q9P2W7 334 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 CD300AQ9UGN4 299 aa14.24□□□□□ -0.13
CD28-203ENST00000458610 NAV2Q8IVL1 2488 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 KPNA4O00629 521 aaPredicted RBP14.23□□□□□ -0.13
CD28-203ENST00000458610 KLF4O43474 513 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 RAD51DO75771 328 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 FUT1P19526 365 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 TCN1P20061 433 aaPredicted RBP14.23□□□□□ -0.13
CD28-203ENST00000458610 SELENOPP49908 381 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 ZP4Q12836 540 aa14.23□□□□□ -0.13
CD28-203ENST00000458610 GABRA6Q16445 453 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms