RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 WDR88Q6ZMY6 472 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 H1FNTQ75WM6 255 aaPredicted RBP16.46■□□□□ 0.23
USP39-209ENST00000458268 TSPYL5Q86VY4 417 aaPredicted RBP16.46■□□□□ 0.23
USP39-209ENST00000458268 EPHX4Q8IUS5 362 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 NINJ1Q92982 152 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 TMEM45BQ96B21 275 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 SLC41A3Q96GZ6 507 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 KCTD14Q9BQ13 255 aaPredicted RBP16.46■□□□□ 0.23
USP39-209ENST00000458268 ESRP2Q9H6T0 727 aaKnown RBP16.46■□□□□ 0.23
USP39-209ENST00000458268 ADA2Q9NZK5 511 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 MALT1Q9UDY8 824 aa16.46■□□□□ 0.23
USP39-209ENST00000458268 DSCAMO60469 2012 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 OR5H1A6NKK0 313 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 C11orf98E9PRG8 122 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 CNOT4O95628 575 aaKnown RBP16.45■□□□□ 0.22
USP39-209ENST00000458268 CH25HO95992 272 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 THY1P04216 161 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 CD3EP07766 207 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 ITGA5P08648 1049 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 NCK1P16333 377 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 AHCYP23526 432 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 LOXP28300 417 aaPredicted RBP16.45■□□□□ 0.22
USP39-209ENST00000458268 GSK3BP49841 420 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 POU3F1Q03052 451 aaPredicted RBP16.45■□□□□ 0.22
USP39-209ENST00000458268 LTBQ06643 244 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 BSPH1Q075Z2 132 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 SWT1Q5T5J6 900 aaKnown RBP16.45■□□□□ 0.22
USP39-209ENST00000458268 ADAM5Q6NVV9 412 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 UEVLDQ8IX04 471 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 RNF148Q8N7C7 305 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 FAM162AQ96A26 154 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 OXGR1Q96P68 337 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 CCL19Q99731 98 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 HOPXQ9BPY8 73 aaPredicted RBP16.45■□□□□ 0.22
USP39-209ENST00000458268 ALG2Q9H553 416 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 AP3M1Q9Y2T2 418 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 ARL2BPQ9Y2Y0 163 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 RNF115Q9Y4L5 304 aa16.45■□□□□ 0.22
USP39-209ENST00000458268 ZNF587BE7ETH6 402 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 M0R1B8 84 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 OR6A2O95222 327 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 HPRP00739 348 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 YAP1P46937 504 aaKnown RBP16.44■□□□□ 0.22
USP39-209ENST00000458268 MXRA7P84157 204 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 MFSD13AQ14CX5 517 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 GABRA6Q16445 453 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 ACKR1Q16570 336 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 DEFB113Q30KQ7 82 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 TIMM23BQ5SRD1 257 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 KLHL24Q6TFL4 600 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 POMGNT2Q8NAT1 580 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 LZICQ8WZA0 190 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 TMEM43Q9BTV4 400 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 EMC6Q9BV81 110 aa16.44■□□□□ 0.22
USP39-209ENST00000458268 AKAP8O43823 692 aaKnown RBP16.43■□□□□ 0.22
USP39-209ENST00000458268 SLC43A1O75387 559 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 UPK3AO75631 287 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 ADORA3P0DMS8 318 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 HLA-DOBP13765 273 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 CD53P19397 219 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 TGFBR3Q03167 851 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 PIN1Q13526 163 aaPredicted RBP16.43■□□□□ 0.22
USP39-209ENST00000458268 HIKESHIQ53FT3 197 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 NCMAPQ5T1S8 102 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 HMBOX1Q6NT76 420 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 FKBP9P1Q75LS8 142 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 ABHD12BQ7Z5M8 362 aaPredicted RBP16.43■□□□□ 0.22
USP39-209ENST00000458268 VTCN1Q7Z7D3 282 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 NKAIN4Q8IVV8 208 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
USP39-209ENST00000458268 GPR137CQ8N3F9 429 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 KBTBD8Q8NFY9 601 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 AKAP1Q92667 903 aaKnown RBP eCLIP16.43■□□□□ 0.22
USP39-209ENST00000458268 NEUROG1Q92886 237 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 MED29Q9NX70 200 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 NPAP1Q9NZP6 1156 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 B3GAT1Q9P2W7 334 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 EGFL7Q9UHF1 273 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 B3GALT5Q9Y2C3 310 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 CORINQ9Y5Q5 1042 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 ROS1P08922 2347 aa16.43■□□□□ 0.22
USP39-209ENST00000458268 OTOGQ6ZRI0 2925 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 DCTN3O75935 186 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 LYPD3O95274 346 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 SERPINA1P01009 418 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 TCN1P20061 433 aaPredicted RBP16.42■□□□□ 0.22
USP39-209ENST00000458268 MPGP29372 298 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 PRDX6P30041 224 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 PUDPQ08623 228 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 OR7E24Q6IFN5 339 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 HACD2Q6Y1H2 254 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 PFN4Q8NHR9 129 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 TMEM255BQ8WV15 326 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 LRRC37BQ96QE4 947 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 USB1Q9BQ65 265 aaKnown RBP16.42■□□□□ 0.22
USP39-209ENST00000458268 RHCGQ9UBD6 479 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 RIMS3Q9UJD0 308 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 POU2F3Q9UKI9 436 aa16.42■□□□□ 0.22
USP39-209ENST00000458268 PRRC2AP48634 2157 aaKnown RBP16.42■□□□□ 0.22
USP39-209ENST00000458268 A0A096LPE4 126 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms