RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 OR5K2Q8NHB8 316 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 PGAP3Q96FM1 320 aaPredicted RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 CLSTN3Q9BQT9 956 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 CHST11Q9NPF2 352 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 UBQLN4Q9NRR5 601 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 MRPS28Q9Y2Q9 187 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 RGPD2P0DJD1 1756 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 TTLL8A6PVC2 850 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 LRRC28Q86X40 367 aaPredicted RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 PPP1R3BQ86XI6 285 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 KDM8Q8N371 416 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 OR5L1Q8NGL2 311 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 SLC38A5Q8WUX1 472 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 INTS12Q96CB8 462 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 TCTN2Q96GX1 697 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 DCLRE1CQ96SD1 692 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 TMEM82A0PJX8 343 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 SULT1C2O00338 296 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 ATXN1LP0C7T5 689 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 NFYBP25208 207 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 MFSD9Q8NBP5 474 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 KHSRPQ92945 711 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■□□□□ 9.8
SNX27-204ENST00000458013 NIPSNAP1Q9BPW8 284 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 EDDM3BP56851 147 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 SLC6A19Q695T7 634 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 FGGYQ96C11 551 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 TP53P04637 393 aaPredicted RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 GDNFP39905 211 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 MLLT11Q13015 90 aaPredicted RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 PDZD11Q5EBL8 140 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 IL34Q6ZMJ4 242 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 LMF2Q9BU23 707 aaKnown RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 SLC19A3Q9BZV2 496 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 DECR2Q9NUI1 292 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 DUSP13Q9UII6 198 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 MYH7BA7E2Y1 1941 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 LCMT2O60294 686 aaKnown RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 PRAMEF4O60810 478 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 UTS2O95399 124 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 SYT9Q86SS6 491 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 ASB11Q8WXH4 323 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 OR5M11Q96RB7 305 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 NME7Q9Y5B8 376 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 E9PI62 339 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 PHF1O43189 567 aaPredicted RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 FOLR1P15328 257 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 TNFRSF17Q02223 184 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 PDE7AQ13946 482 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 RBM12BQ8IXT5 1001 aaKnown RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 RAB3CQ96E17 227 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 MYOTQ9UBF9 498 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 CLEC2DQ9UHP7 191 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 CCDC88AQ3V6T2 1871 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 AIPO00170 330 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 HTR3AP46098 478 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 P2RX3P56373 397 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 GPR176Q14439 515 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 UBE2FQ969M7 185 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 PATZ1Q9HBE1 687 aaKnown RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 SNAPINO95295 136 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 BLVRBP30043 206 aaPredicted RBP18.23■□□□□ 0.51
SNX27-204ENST00000458013 ALG12Q9BV10 488 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 NRSN2Q9GZP1 204 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 RNF167Q9H6Y7 350 aa18.23■□□□□ 0.51
SNX27-204ENST00000458013 CCSMST1Q4G0I0 132 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 MARCH8Q5T0T0 291 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 KCNIP4Q6PIL6 250 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 GHSRQ92847 366 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 GATA6Q92908 595 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ZNF264O43296 627 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ZFAND5O76080 213 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 CLEC3BP05452 202 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 OR13C7P0DN81 318 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 HES1Q14469 280 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 KCNAB1Q14722 419 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 TRNP1Q6NT89 227 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ANKRD9Q96BM1 317 aaPredicted RBP18.22■□□□□ 0.51
SNX27-204ENST00000458013 WDR83Q9BRX9 315 aaKnown RBP18.22■□□□□ 0.51
SNX27-204ENST00000458013 PRKNO60260 465 aaPredicted RBP18.22■□□□□ 0.51
SNX27-204ENST00000458013 TANGO2Q6ICL3 276 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 HTR3DQ70Z44 454 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 MED25Q71SY5 747 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 TIMM29Q9BSF4 260 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ENTPD2Q9Y5L3 495 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 URGCP-MRPS24S4R325 110 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 KLHL33A6NCF5 533 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 PRAF2O60831 178 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ANXA7P20073 488 aaKnown RBP18.22■□□□□ 0.51
SNX27-204ENST00000458013 CD38P28907 300 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ARHGAP11BQ3KRB8 267 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 OR52I1Q8NGK6 324 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 NTNG1Q9Y2I2 539 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 NUMBLQ9Y6R0 609 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 DNAJB6O75190 326 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 RAB5CP51148 216 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 SUOXP51687 545 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 OR1D5P58170 312 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ZNF740Q8NDX6 193 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 PPP1R35Q8TAP8 253 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms