RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 MRGPRX4Q96LA9 322 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 IP6K3Q96PC2 410 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 TSSK2Q96PF2 358 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 ERMAPQ96PL5 475 aaPredicted RBP7.84□□□□□ -1.15
RIF1-208ENST00000457745 CCNL2Q96S94 520 aaPredicted RBP7.84□□□□□ -1.15
RIF1-208ENST00000457745 GPX7Q96SL4 187 aaPredicted RBP7.84□□□□□ -1.15
RIF1-208ENST00000457745 TTTY12Q9BZ98 90 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 SLC19A3Q9BZV2 496 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 OR2B2Q9GZK3 357 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 NRIP3Q9NQ35 241 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 CLEC2DQ9UHP7 191 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 HSPE1-MOB4S4R3N1 261 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 FRYQ5TBA9 3013 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 CEP295Q9C0D2 2601 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 NCOR2Q9Y618 2525 aa7.84□□□□□ -1.15
RIF1-208ENST00000457745 PTPRQQ9UMZ3 2332 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 IGHV3-15A0A0B4J1V0 119 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 IGKV1D-43A0A0B4J1Z2 117 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 OR6C68A6NDL8 312 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 FAM171A2A8MVW0 826 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 PRR32B1ATL7 298 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 C1QTNF9BB2RNN3 333 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 BLOC1S5-TXNDC5H3BN57 136 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 LRRTM2O43300 516 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 SERPINI2O75830 405 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 INMTO95050 263 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 NDUFB2O95178 105 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 SNX4O95219 450 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 AHSA1O95433 338 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 IGF2P01344 180 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 LCKP06239 509 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 C1QTNF9P0C862 333 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 TFPIP10646 304 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 DBTP11182 482 aaKnown RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 SRD5A2P31213 254 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 TNFSF10P50591 281 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 SMSP52788 366 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 GP2P55259 537 aaKnown RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 GFRA1P56159 465 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 DSCR4P56555 118 aaPredicted RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 CTXN1P60606 82 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 CDC42P60953 191 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 TLE3Q04726 772 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.83□□□□□ -1.16
RIF1-208ENST00000457745 ITGADQ13349 1161 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 PMS2P3Q13401 168 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 IRF3Q14653 427 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 OCLNQ16625 522 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 TMEM176BQ3YBM2 270 aaPredicted RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 NADK2Q4G0N4 442 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 RBM48Q5RL73 367 aaKnown RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 RAET1LQ5VY80 246 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 SLC25A25Q6KCM7 469 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 NIPAL3Q6P499 406 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 ZNF773Q6PK81 442 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 B3GNT6Q6ZMB0 384 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 NANOGNBQ7Z5D8 188 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 DND1Q8IYX4 353 aaKnown RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 OR2T33Q8NG76 320 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 OR52E2Q8NGJ4 325 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 OR51L1Q8NGJ5 315 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 ZNF519Q8TB69 540 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 FAR1Q8WVX9 515 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 TMEM234Q8WY98 164 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 OSTF1Q92882 214 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 LGALS12Q96DT0 336 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 ADGRG7Q96K78 797 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 UCN2Q96RP3 112 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 NMNAT3Q96T66 252 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 TIMP4Q99727 224 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 FAM173AQ9BQD7 235 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 ZNF649Q9BS31 505 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 NMNAT2Q9BZQ4 307 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 NAA50Q9GZZ1 169 aaKnown RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 RBM38Q9H0Z9 239 aaKnown RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 TSPAN10Q9H1Z9 355 aaPredicted RBP7.83□□□□□ -1.16
RIF1-208ENST00000457745 FKRPQ9H9S5 495 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 ZFP64Q9NPA5 681 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 TIMMDC1Q9NPL8 285 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 CMC2Q9NRP2 79 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 SDHAF3Q9NRP4 125 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 PLCXD1Q9NUJ7 323 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 IMPAD1Q9NX62 359 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 LUZP4Q9P127 313 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 ZNF229Q9UJW7 825 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 DKKL1Q9UK85 242 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 RAXQ9Y2V3 346 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 ACACAQ13085 2346 aa7.83□□□□□ -1.16
RIF1-208ENST00000457745 MED19A0JLT2 244 aaPredicted RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 TNFSF11O14788 317 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 ZNF208O43345 1280 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 CBR3O75828 277 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 RCBTB2O95199 551 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 FADS2O95864 444 aaKnown RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 PTHP01270 115 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 TFP02787 698 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 CCDC159P0C7I6 412 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms