RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FOXC2Q99958 501 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 LIME1Q9H400 295 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 SLC7A10Q9NS82 523 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 ZNF587BE7ETH6 402 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 SIAH2O43255 324 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 FZD7O75084 574 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 RAD51DO75771 328 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 HIST1H2ABP04908 130 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 CD3EP07766 207 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 EDNRAP25101 427 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 NTF4P34130 210 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 NPTX1Q15818 432 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 ACKR1Q16570 336 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 TSPO2Q5TGU0 170 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 NIPAL3Q6P499 406 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 KLHL17Q6TDP4 642 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 LINC00114Q6XXX2 140 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 HIST3H2AQ7L7L0 130 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 PIGWQ7Z7B1 504 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 RBM45Q8IUH3 476 aaKnown RBP20.43■□□□□ 0.86
CBX3-204ENST00000456948 C17orf78Q8N4C9 275 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 HIST1H2ACQ93077 130 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 MUS81Q96NY9 551 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 KCTD14Q9BQ13 255 aaPredicted RBP20.43■□□□□ 0.86
CBX3-204ENST00000456948 UBTD1Q9HAC8 227 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 SPAG4Q9NPE6 437 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 MRPL39Q9NYK5 338 aaKnown RBP20.43■□□□□ 0.86
CBX3-204ENST00000456948 SLC7A7Q9UM01 511 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 RCE1Q9Y256 329 aa20.43■□□□□ 0.86
CBX3-204ENST00000456948 CXCR6O00574 342 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 CBLP22681 906 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 PAX7P23759 505 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 CLDN17P56750 224 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 PSME3P61289 254 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 KLHL24Q6TFL4 600 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 DEF8Q6ZN54 512 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 EPHX4Q8IUS5 362 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 KDM8Q8N371 416 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 SLC41A3Q96GZ6 507 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 USP22Q9UPT9 525 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 NOX1Q9Y5S8 564 aa20.42■□□□□ 0.86
CBX3-204ENST00000456948 MAGED1Q9Y5V3 778 aaPredicted RBP20.42■□□□□ 0.86
CBX3-204ENST00000456948 SLC43A1O75387 559 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 OR5F1O95221 314 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 THRBP10828 461 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 MNAT1P51948 309 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 CRYBA2P53672 197 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 HMBOX1Q6NT76 420 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 ZNF704Q6ZNC4 412 aaPredicted RBP20.41■□□□□ 0.86
CBX3-204ENST00000456948 OR4D11Q8NGI4 311 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 HS6ST2Q96MM7 605 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 ALPK1Q96QP1 1244 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 NANSQ9NR45 359 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 BEX4Q9NWD9 120 aaPredicted RBP20.41■□□□□ 0.86
CBX3-204ENST00000456948 NDE1Q9NXR1 346 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 ADA2Q9NZK5 511 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 AMDHD2Q9Y303 409 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 RNF115Q9Y4L5 304 aa20.41■□□□□ 0.86
CBX3-204ENST00000456948 NME4O00746 187 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 ATE1O95260 518 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 BGLAPP02818 100 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 AHCYP23526 432 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 RBM34P42696 430 aaKnown RBP20.4■□□□□ 0.86
CBX3-204ENST00000456948 GSK3BP49841 420 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 PUDPQ08623 228 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 GABRA6Q16445 453 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 NCMAPQ5T1S8 102 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 GKAP1Q5VSY0 366 aaPredicted RBP20.4■□□□□ 0.86
CBX3-204ENST00000456948 C8orf82Q6P1X6 216 aaPredicted RBP20.4■□□□□ 0.86
CBX3-204ENST00000456948 SPNS3Q6ZMD2 512 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 GPR137CQ8N3F9 429 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 PIK3C3Q8NEB9 887 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 OR5J2Q8NH18 312 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 FAM162AQ96A26 154 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 RADILQ96JH8 1075 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 HS3ST6Q96QI5 342 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 LINC00470Q9BZP3 86 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 FKRPQ9H9S5 495 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 RIMS3Q9UJD0 308 aa20.4■□□□□ 0.86
CBX3-204ENST00000456948 ZNF726A6NNF4 738 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 PDLIM1O00151 329 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 ZNF682O95780 498 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 WNT11O96014 354 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 IFNW1P05000 195 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 ITGA5P08648 1049 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 OR1E2P47887 323 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 SELENOPP49908 381 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 SH3BGRP55822 239 aaPredicted RBP20.39■□□□□ 0.85
CBX3-204ENST00000456948 PRPS1P60891 318 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 ST3GAL3Q11203 375 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 DEFB113Q30KQ7 82 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 TMEM108Q6UXF1 575 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 FKBP9P1Q75LS8 142 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 PXKQ7Z7A4 578 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 DEPDC4Q8N2C3 294 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 ANKS4BQ8N8V4 417 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 ANKK1Q8NFD2 765 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 OR52N5Q8NH56 324 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 ABCD2Q9UBJ2 740 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 TAGLN3Q9UI15 199 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms