RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CLCQ05315 142 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 TRMT5Q32P41 509 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 DMRTC1Q5HYR2 192 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 RNASEH2BQ5TBB1 312 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 GPR157Q5UAW9 335 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 GKAP1Q5VSY0 366 aaPredicted RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 C11orf88Q6PI97 169 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 PAQR6Q6TCH4 344 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 LRRN1Q6UXK5 716 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 MEPCEQ7L2J0 689 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 ZNF771Q7L3S4 317 aaPredicted RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 AAED1Q7RTV5 226 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 LRP11Q86VZ4 500 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 CMIPQ8IY22 773 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 CCDC36Q8IYA8 594 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 C1orf174Q8IYL3 243 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 SPICQ8N5J4 248 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 C1orf52Q8N6N3 182 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 TMCO5AQ8N6Q1 288 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 CPEB3Q8NE35 698 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 ADAMTS15Q8TE58 950 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 TMEM234Q8WY98 164 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 LRTOMTQ8WZ04 291 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 ELP4Q96EB1 424 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 AURKBQ96GD4 344 aaPredicted RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 ALKBH3Q96Q83 286 aaPredicted RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 HOXD1Q9GZZ0 328 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 QRSL1Q9H0R6 528 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 VPS11Q9H270 941 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 NELFAQ9H3P2 528 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 PIF1Q9H611 641 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 EQTNQ9NQ60 294 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 DECR2Q9NUI1 292 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 GAR1Q9NY12 217 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 CHRNA9Q9UGM1 479 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 GRID1Q9ULK0 1009 aa6.61□□□□□ -1.35
LINC01961-201ENST00000449954 TNPO3Q9Y5L0 923 aaKnown RBP6.61□□□□□ -1.35
LINC01961-201ENST00000449954 GNG14A0A1W2PPG7 69 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 CCDC189A1A4V9 331 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 TPD52L2O43399 206 aaKnown RBP6.6□□□□□ -1.35
LINC01961-201ENST00000449954 EIF4E2O60573 245 aaKnown RBP6.6□□□□□ -1.35
LINC01961-201ENST00000449954 MBD3O95983 291 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 MT-ND5P03915 603 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 PRPS2P11908 318 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 GFAPP14136 432 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 CD80P33681 288 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 SLC6A9P48067 706 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 CCNG1P51959 295 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 ALDH18A1P54886 795 aaKnown RBP6.6□□□□□ -1.35
LINC01961-201ENST00000449954 GALK2Q01415 458 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 MGAT5Q09328 741 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 MERTKQ12866 999 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 FXNQ16595 210 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 KCTD19Q17RG1 926 aaPredicted RBP6.6□□□□□ -1.35
LINC01961-201ENST00000449954 GGTA1PQ4G0N0 100 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 KLHL26Q53HC5 615 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 ESCO2Q56NI9 601 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 STEAP4Q687X5 459 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 DHRS7BQ6IAN0 325 aaPredicted RBP6.6□□□□□ -1.35
LINC01961-201ENST00000449954 PGBD2Q6P3X8 592 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 BRD3OSQ6XYD6 125 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 ISCA2Q86U28 154 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 KLHL36Q8N4N3 616 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 COX18Q8N8Q8 333 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 OR4F17Q8NGA8 305 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 MGARPQ8TDB4 240 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 CFHR4Q92496 578 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 ATP6V1E2Q96A05 226 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 OR4F4Q96R69 305 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 NAA11Q9BSU3 229 aaPredicted RBP6.6□□□□□ -1.35
LINC01961-201ENST00000449954 SF3B5Q9BWJ5 86 aaKnown RBP6.6□□□□□ -1.35
LINC01961-201ENST00000449954 NMUR2Q9GZQ4 415 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 CAB39LQ9H9S4 337 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 NMRAL1Q9HBL8 299 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 PALMDQ9NP74 551 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 SLCO1C1Q9NYB5 712 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 TRAPPC4Q9Y296 219 aa6.6□□□□□ -1.35
LINC01961-201ENST00000449954 DOCK11Q5JSL3 2073 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 ZNF816-ZNF321PA0A0X1KG74 233 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 WI2-2373I1.2A0A1W2PRP0 233 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 ANKRD28O15084 1053 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 ZNF264O43296 627 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 PCDH7O60245 1069 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 MGRN1O60291 552 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 BANF1O75531 89 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
LINC01961-201ENST00000449954 RSL1D1O76021 490 aaKnown RBP6.59□□□□□ -1.35
LINC01961-201ENST00000449954 TGDSO95455 350 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 FGGP02679 453 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 UBL4AP11441 157 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 ZNF35P13682 527 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 DDCP20711 480 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 ATP6V1C1P21283 382 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 LSP1P33241 339 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 APOBEC1P41238 236 aaKnown RBP6.59□□□□□ -1.35
LINC01961-201ENST00000449954 PTDSS1P48651 473 aaKnown RBP6.59□□□□□ -1.35
LINC01961-201ENST00000449954 KLF3P57682 345 aaPredicted RBP6.59□□□□□ -1.35
LINC01961-201ENST00000449954 SESN3P58005 492 aa6.59□□□□□ -1.35
LINC01961-201ENST00000449954 OR2B6P58173 313 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms