RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 GABARAPL1Q9H0R8 117 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 NARFLQ9H6Q4 476 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 PPP4R1LQ9P1A2 415 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 NPIPA1Q9UND3 350 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 ABCG2Q9UNQ0 655 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 CORO2BQ9UQ03 480 aa8.93□□□□□ -0.98
CCDC171-203ENST00000449575 DIDO1Q9BTC0 2240 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 A0A075B6Q4 140 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 CCDC182A6NF36 153 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 A8MV72 311 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 SHISA8B8ZZ34 492 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 OR7A10O76100 309 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 SOX30O94993 753 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 EPPINO95925 133 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 NGFRP08138 427 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 RPS4Y1P22090 263 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 ANXA11P50995 505 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TDGF1P3P51864 188 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TLE1Q04724 770 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TOMM34Q15785 309 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TBCEQ15813 527 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 VMACQ2NL98 169 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TIMM50Q3ZCQ8 353 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 REEP3Q6NUK4 255 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 FAM180AQ6UWF9 173 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 ARSKQ6UWY0 536 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 OR5M1Q8NGP8 315 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 CNOT9Q92600 299 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 MYDGFQ969H8 173 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TMEFF2Q9UIK5 374 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TBC1D24Q9ULP9 559 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 TENM4Q6N022 2769 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 A0A0X1KG70 313 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 SERINC4A6NH21 518 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 FRS3O43559 492 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 CYP7B1O75881 506 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 GADD45AP24522 165 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 GDF1P27539 372 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 HLA-DMAP28067 261 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 RPP38P78345 283 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 ALDH6A1Q02252 535 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 FGFBP1Q14512 234 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 EIPR1Q53HC9 387 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 Q5BKY6 102 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 SHQ1Q6PI26 577 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF836Q6ZNA1 936 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 SLC46A3Q7Z3Q1 461 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 YRDCQ86U90 279 aaKnown RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 DEPDC4Q8N2C3 294 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 C11orf65Q8NCR3 313 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 OR2T12Q8NG77 320 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 OR2M3Q8NG83 312 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 OR10Q1Q8NGQ4 319 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 NR4A3Q92570 626 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 RELTQ969Z4 430 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 FAM162AQ96A26 154 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 MTHFD2LQ9H903 347 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 RANGRFQ9HD47 186 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 BOKQ9UMX3 212 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-203ENST00000449575 MYO18BQ8IUG5 2567 aa8.92□□□□□ -0.98
CCDC171-203ENST00000449575 A0A1W2PQD3 144 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 C5orf58C9J3I9 102 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 TFECO14948 347 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 HCRTR2O43614 444 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 CDC40O60508 579 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 LCKP06239 509 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 TGFBR1P36897 503 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 LIPAP38571 399 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 PCBP3P57721 371 aaKnown RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 KCNJ10P78508 379 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 SCN1BQ07699 218 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 MAD2L1BPQ15013 274 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 TIGD6Q17RP2 521 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF630Q2M218 657 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 MRPL2Q5T653 305 aaKnown RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 FADS6Q8N9I5 356 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 FAM98AQ8NCA5 519 aaKnown RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 OR52P1PQ8NH57 321 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 LILRB1Q8NHL6 650 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 DEDD2Q8WXF8 326 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 SLC6A15Q9H2J7 730 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 KCNN2Q9H2S1 579 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 RIBC2Q9H4K1 309 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 ZDHHC11Q9H8X9 412 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 LIN7BQ9HAP6 207 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 BCL2L10Q9HD36 194 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 POLE3Q9NRF9 147 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 VDAC3Q9Y277 283 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 RPH3AQ9Y2J0 694 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-203ENST00000449575 A0A0G2JPF8 293 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 LEUTXA8MZ59 168 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 TMEM229AB2RXF0 380 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 HNRNPCL2B2RXH8 293 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 HNRNPCL3B7ZW38 293 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 TRAPPC6AO75865 159 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 CSTAP01040 98 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 GKN3PP0CG01 181 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 HNRNPCL4P0DMR1 293 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 PSKH1P11801 424 aa8.91□□□□□ -0.98
CCDC171-203ENST00000449575 PRG2P13727 222 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms