RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TAGLN3Q9UI15 199 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 SLC7A7Q9UM01 511 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 GPR52Q9Y2T5 361 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 FLVCR1Q9Y5Y0 555 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 HIVEP2P31629 2446 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 ROS1P08922 2347 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 TRAPPC13A5PLN9 417 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 SHOX2O60902 331 aaPredicted RBP12.88□□□□□ -0.35
USP39-206ENST00000448971 ZNF682O95780 498 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 HRGP04196 525 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 NQO1P15559 274 aaKnown RBP12.88□□□□□ -0.35
USP39-206ENST00000448971 PPP3CBP16298 524 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 EDNRAP25101 427 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 TAS2R41P59536 307 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 TSC22D1Q15714 1073 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 ALKBH2Q6NS38 261 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 Q6ZT83 130 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 CCDC197Q8NCU1 140 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 STEAP2Q8NFT2 490 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 SF3B5Q9BWJ5 86 aaKnown RBP12.88□□□□□ -0.35
USP39-206ENST00000448971 ABCD2Q9UBJ2 740 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 RASD1Q9Y272 281 aa12.88□□□□□ -0.35
USP39-206ENST00000448971 M0R082 166 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 KPNA4O00629 521 aaPredicted RBP12.87□□□□□ -0.35
USP39-206ENST00000448971 LYZL6O75951 148 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 VAMP5O95183 116 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 GRPRP30550 384 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 OR1E2P47887 323 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 ITGADQ13349 1161 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 MFSD13AQ14CX5 517 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 P2RY6Q15077 328 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 STK11Q15831 433 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 SFRP5Q5T4F7 317 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 TTC33Q6PID6 262 aaPredicted RBP12.87□□□□□ -0.35
USP39-206ENST00000448971 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 PRIMA1Q86XR5 153 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 WFDC8Q8IUA0 241 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 ZNF417Q8TAU3 575 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 TAAR8Q969N4 342 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 S100PBPQ96BU1 408 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 PIK3IP1Q96FE7 263 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 SLC41A3Q96GZ6 507 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 ZNF587Q96SQ5 575 aaPredicted RBP12.87□□□□□ -0.35
USP39-206ENST00000448971 TMEM43Q9BTV4 400 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 ASPNQ9BXN1 380 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 PCDHAC1Q9H158 963 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 ARL8BQ9NVJ2 186 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
USP39-206ENST00000448971 PARPBPQ9NWS1 579 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 UPB1Q9UBR1 384 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 SEC14L4Q9UDX3 406 aa12.87□□□□□ -0.35
USP39-206ENST00000448971 GMNNO75496 209 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
USP39-206ENST00000448971 SERPINA1P01009 418 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 HEXAP06865 529 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 NCK1P16333 377 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 CRYGSP22914 178 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 SELENOWP63302 87 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 NKX6-1P78426 367 aaPredicted RBP12.86□□□□□ -0.35
USP39-206ENST00000448971 SHEQ5VZ18 495 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 FBXW9Q5XUX1 488 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 C16orf89Q6UX73 402 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 BHLHA15Q7RTS1 189 aaPredicted RBP12.86□□□□□ -0.35
USP39-206ENST00000448971 AAED1Q7RTV5 226 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 PGAM4Q8N0Y7 254 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 RNF148Q8N7C7 305 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 ANKS4BQ8N8V4 417 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 TMEM45BQ96B21 275 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 MPP4Q96JB8 637 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 ZNF385AQ96PM9 386 aaKnown RBP12.86□□□□□ -0.35
USP39-206ENST00000448971 MDFIQ99750 246 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 HDHD5Q9BXW7 423 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 POLR2J2Q9GZM3 115 aaKnown RBP12.86□□□□□ -0.35
USP39-206ENST00000448971 POLR2J3Q9H1A7 115 aaKnown RBP12.86□□□□□ -0.35
USP39-206ENST00000448971 OR10A4Q9H209 315 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 ASB6Q9NWX5 421 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 MALT1Q9UDY8 824 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 EGFL7Q9UHF1 273 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 CORINQ9Y5Q5 1042 aa12.86□□□□□ -0.35
USP39-206ENST00000448971 FBN1P35555 2871 aaKnown RBP12.86□□□□□ -0.35
USP39-206ENST00000448971 CIB4A0PJX0 185 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 AKAP8O43823 692 aaKnown RBP12.85□□□□□ -0.35
USP39-206ENST00000448971 RAD51DO75771 328 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 KRT33AO76009 404 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 OR5F1O95221 314 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 LY6G6DO95868 133 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 BGLAPP02818 100 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 IFNW1P05000 195 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 ZNF43P17038 809 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 GGT1P19440 569 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 TCN1P20061 433 aaPredicted RBP12.85□□□□□ -0.35
USP39-206ENST00000448971 COX5AP20674 150 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 IFNA8P32881 189 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 P2RY4P51582 365 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms