RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ENPP4Q9Y6X5 453 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 ABCA1O95477 2261 aa12.21□□□□□ -0.46
PDLIM2-213ENST00000448520 A0A0J9YW62 118 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 A0A1B0GWA3 101 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 H3BNX3 289 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 TIPRLO75663 272 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 KRT36O76013 467 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 LYPD3O95274 346 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 FABP3P05413 133 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 GPIP06744 558 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 PRKCAP17252 672 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 CCNA2P20248 432 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 PCSK6P29122 969 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 SUMO3P55854 103 aaPredicted RBP12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 ATP5J2P56134 94 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 ELF3P78545 371 aaPredicted RBP12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 CBFBQ13951 182 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 RNPS1Q15287 305 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 OR1Q1Q15612 314 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 ZSWIM7Q19AV6 140 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM201Q5SNT2 666 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 ADAM5Q6NVV9 412 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 RANBP3LQ86VV4 465 aaPredicted RBP12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 PRIMA1Q86XR5 153 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 WFDC8Q8IUA0 241 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 LILRA2Q8N149 483 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 KLHL15Q96M94 604 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 ZNF300Q96RE9 604 aaPredicted RBP12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 TACO1Q9BSH4 297 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 MAGIXQ9H6Y5 334 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 IL1RAPQ9NPH3 570 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 VNN3Q9NY84 501 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 TESQ9UGI8 421 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 A4GNTQ9UNA3 340 aa12.2□□□□□ -0.46
PDLIM2-213ENST00000448520 GJE1A6NN92 205 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 EFNA2O43921 213 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 PRSS23O95084 383 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 OPN1LWP04000 364 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 RAP2AP10114 183 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 UMPSP11172 480 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 PGCP20142 388 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 TACR3P29371 465 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 MAGEA2P43356 314 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 TAS2R41P59536 307 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 PPP1R8Q12972 351 aaKnown RBP12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 WDR88Q6ZMY6 472 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 RNF217Q8TC41 542 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 ADAMTS16Q8TE57 1224 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 CPNE4Q96A23 557 aaPredicted RBP12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 DNAJA3Q96EY1 480 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 PRRC1Q96M27 445 aa12.19□□□□□ -0.46
PDLIM2-213ENST00000448520 ALPK2Q86TB3 2170 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 ZANQ9Y493 2812 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 PLAUP00749 431 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 ELK4P28324 431 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 SHC1P29353 583 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 AGTR1P30556 359 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 SLC7A1P30825 629 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 CDH12P55289 794 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 ETFDHQ16134 617 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 WBP2NLQ6ICG8 309 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 HMBOX1Q6NT76 420 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 SLC43A2Q8N370 569 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 PAPD5Q8NDF8 572 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 ATP6V1C2Q8NEY4 427 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 HSD17B8Q92506 261 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 C3orf49Q96BT1 292 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 DUS3LQ96G46 650 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 TRIM2Q9C040 744 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM185BQ9H7F4 350 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM27Q9HBJ8 222 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 S100A14Q9HCY8 104 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 MAN2C1Q9NTJ4 1040 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 ACER3Q9NUN7 267 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 RIMS3Q9UJD0 308 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 OSGIN1Q9UJX0 560 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 SLC7A7Q9UM01 511 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 RRP15Q9Y3B9 282 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 AP4S1Q9Y587 144 aa12.18□□□□□ -0.46
PDLIM2-213ENST00000448520 A0A0B4J2E0 115 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 A0A1B0GX12 115 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 TRAPPC13A5PLN9 417 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 FAAHO00519 579 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 FMO6PO60774 539 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 IL32P24001 234 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 RRM2P31350 389 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 SFTPDP35247 375 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 IDUAP35475 653 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 COPZ1P61923 177 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 RPS4XP62701 263 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 LSM11P83369 360 aaKnown RBP eCLIP12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 SPIBQ01892 262 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 MERTKQ12866 999 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 P2RY6Q15077 328 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 ZNF239Q16600 458 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms