RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ZNF806P0C7X5 589 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 HIST1H1CP16403 213 aaKnown RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 RFC3P40938 356 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 PRMT2P55345 433 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 BLOC1S1P78537 153 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 CCDC157Q569K6 752 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 RAB12Q6IQ22 244 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 TMEM71Q6P5X7 295 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 RBMS3Q6XE24 437 aaKnown RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 SVBPQ8N300 66 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 EID2Q8N6I1 236 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 ZNF614Q8N883 585 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 CAPN10Q9HC96 672 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 NCDNQ9UBB6 729 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 ADAM18Q9Y3Q7 739 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 SCN5AQ14524 2016 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 MPDZO75970 2070 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 LATO43561 262 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 SNAPC5O75971 98 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 CD3DP04234 171 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 ACAA1P09110 424 aaPredicted RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 LAMP2P13473 410 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 ADRA2CP18825 462 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 HIST1H1TP22492 207 aaPredicted RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 NFYBP25208 207 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 BCL6P41182 706 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 NPBWR1P48145 328 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 MECP2P51608 486 aaKnown RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 EFNB2P52799 333 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 DUSP5Q16690 384 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 AMZ1Q400G9 498 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 LY6G6FQ5SQ64 297 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 JMJD6Q6NYC1 403 aaPredicted RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 OR2L2Q8NH16 312 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 PTDSS2Q9BVG9 487 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 TCF7L1Q9HCS4 588 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 TRPM6Q9BX84 2022 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 A0A1B0GTH9 108 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 PRR32B1ATL7 298 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 WASH3PC4AMC7 463 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 TO15178 435 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 SULT1B1O43704 296 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 GLSO94925 669 aaPredicted RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 CXCL14O95715 111 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 ELNP15502 786 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 CAPZA2P47755 286 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 LTBQ06643 244 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 SMAD2Q15796 467 aaKnown RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 PRAMEF8Q5VWM4 474 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 PRAMEF7Q5VXH5 474 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 ZCCHC12Q6PEW1 402 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 STAC2Q6ZMT1 411 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 STEAP2Q8NFT2 490 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 OR1M1Q8NGA1 313 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 MIB2Q96AX9 1013 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 NUS1Q96E22 293 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 CPNE2Q96FN4 548 aaPredicted RBP12.79□□□□□ -0.36
VPS52-212ENST00000445902 APMAPQ9HDC9 416 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 ADAM29Q9UKF5 820 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 MED31Q9Y3C7 131 aa12.79□□□□□ -0.36
VPS52-212ENST00000445902 NARSO43776 548 aaKnown RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 PRICKLE3O43900 615 aaPredicted RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 FABP1P07148 127 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 AK4P27144 223 aaPredicted RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 ACTA2P62736 377 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 ACTG2P63267 376 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 AKIRIN2Q53H80 203 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 H3F3CQ6NXT2 135 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 TMCO2Q7Z6W1 182 aaPredicted RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 ZPLD1Q8TCW7 415 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 RXFP4Q8TDU9 374 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 PAQR8Q8TEZ7 354 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 HSPA12BQ96MM6 686 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 PDCD10Q9BUL8 212 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 TLNRD1Q9H1K6 362 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 DPEP2Q9H4A9 486 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 MTHFD2LQ9H903 347 aaPredicted RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 OR5H14A6NHG9 310 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 FADS1O60427 444 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 PAPLNO95428 1278 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 RAB40ALP0C0E4 278 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 ID2Q02363 134 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 SNTB1Q13884 538 aaKnown RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 SLC48A1Q6P1K1 146 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 TMPRSS9Q7Z410 1059 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 KRT77Q7Z794 578 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 DND1Q8IYX4 353 aaKnown RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 CAMKVQ8NCB2 501 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 RAB40AQ8WXH6 277 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 MS4A6EQ96DS6 147 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 FBXO17Q96EF6 278 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 CMTM3Q96MX0 182 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 PTCHD1Q96NR3 888 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 ABT1Q9ULW3 272 aaKnown RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 ZNF780BQ9Y6R6 833 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms