RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 GASTP01350 101 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 ACVR2AP27037 513 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 OMPP47874 163 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 CASP6P55212 293 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 PMS2P3Q13401 168 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 ZNF239Q16600 458 aaKnown RBP15.37■□□□□ 0.05
LIME1-202ENST00000444951 C1orf185Q5T7R7 199 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 NANOGNBQ7Z5D8 188 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 ZDHHC13Q8IUH4 622 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 RPRMLQ8N4K4 120 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 LINC00471Q8N535 108 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 OR51A7Q8NH64 312 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 GNPDA2Q8TDQ7 276 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 SDCCAG3Q96C92 435 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 FEVQ99581 238 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 GPA33Q99795 319 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 CIB1Q99828 191 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 TP63Q9H3D4 680 aaPredicted RBP15.37■□□□□ 0.05
LIME1-202ENST00000444951 DCLRE1BQ9H816 532 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 PAQR5Q9NXK6 330 aaPredicted RBP15.37■□□□□ 0.05
LIME1-202ENST00000444951 KIF17Q9P2E2 1029 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 NKX1-2Q9UD57 310 aaPredicted RBP15.37■□□□□ 0.05
LIME1-202ENST00000444951 ZNF229Q9UJW7 825 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 TRAV27A0A087WT01 109 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 UNC119BA6NIH7 251 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 C11orf98E9PRG8 122 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 BLOC1S5-TXNDC5H3BN57 136 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 PDLIM1O00151 329 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 CDC42EP2O14613 210 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 SMAD9O15198 467 aaKnown RBP15.36■□□□□ 0.05
LIME1-202ENST00000444951 EIF1BO60739 113 aaKnown RBP15.36■□□□□ 0.05
LIME1-202ENST00000444951 RAMP1O60894 148 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 SERPINI2O75830 405 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 AQP8O94778 261 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 OR6A2O95222 327 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 TGM6O95932 706 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 GABRA1P14867 456 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 GK3PQ14409 553 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 MFSD13AQ14CX5 517 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 SF3B4Q15427 424 aaKnown RBP eCLIP15.36■□□□□ 0.057e-10■■■■□ 22.8
LIME1-202ENST00000444951 ZNF770Q6IQ21 691 aaPredicted RBP15.36■□□□□ 0.05
LIME1-202ENST00000444951 MTFR2Q6P444 385 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 H1FNTQ75WM6 255 aaPredicted RBP15.36■□□□□ 0.05
LIME1-202ENST00000444951 FCRLAQ7L513 359 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 OAFQ86UD1 273 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 GPAT4Q86UL3 456 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 HIPK1Q86Z02 1210 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 ZNF295-AS1Q8N0V1 137 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 KDM8Q8N371 416 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 ATG16L2Q8NAA4 619 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 OR5J2Q8NH18 312 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 OR6S1Q8NH40 331 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 FKRPQ9H9S5 495 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 CHST11Q9NPF2 352 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 CLEC4AQ9UMR7 237 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 MEMO1Q9Y316 297 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 CCDC168Q8NDH2 2452 aa15.36■□□□□ 0.05
LIME1-202ENST00000444951 F8P00451 2351 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 ADORA3P0DMS8 318 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 AHCYP23526 432 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 TRIP10Q15642 601 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 TMEM225Q6GV28 225 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 RTL6Q6ICC9 239 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 C1orf94Q6P1W5 598 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 XKRXQ6PP77 449 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 PAQR6Q6TCH4 344 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 TMPRSS11FQ6ZWK6 438 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 SVOPLQ8N434 492 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 ABHD3Q8WU67 409 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 ZNF775Q96BV0 537 aaPredicted RBP15.35■□□□□ 0.05
LIME1-202ENST00000444951 NRBF2Q96F24 287 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 TNFRSF13CQ96RJ3 184 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 NIPSNAP1Q9BPW8 284 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 SMURF2Q9HAU4 748 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 CLCF1Q9UBD9 225 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 MGAT4BQ9UQ53 548 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 FAM215AQ9Y5M1 114 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 CORINQ9Y5Q5 1042 aa15.35■□□□□ 0.05
LIME1-202ENST00000444951 AQP7P3A6NL99 342 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 PLPP3O14495 311 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 ASAH2BP0C7U1 165 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 COX6B1P14854 86 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 PTGER4P35408 488 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 AQP2P41181 271 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 AGFG1P52594 562 aaKnown RBP15.34■□□□□ 0.05
LIME1-202ENST00000444951 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 NSUN5P2Q63ZY6 315 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 B3GNT6Q6ZMB0 384 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 EPHX4Q8IUS5 362 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 GCNT2Q8N0V5 402 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 C9orf106Q8NAJ2 232 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 MOSPD2Q8NHP6 518 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 LURAP1Q96LR2 239 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 ZNF556Q9HAH1 456 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 MRPL39Q9NYK5 338 aaKnown RBP15.34■□□□□ 0.05
LIME1-202ENST00000444951 STX18Q9P2W9 335 aaKnown RBP15.34■□□□□ 0.05
LIME1-202ENST00000444951 IL20RAQ9UHF4 553 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 ZNF175Q9Y473 711 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 KIAA1549Q9HCM3 1950 aa15.34■□□□□ 0.05
LIME1-202ENST00000444951 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms