RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 MTURNQ8N3F0 131 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 FNDC5Q8NAU1 212 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SLC16A11Q8NCK7 471 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 BEST4Q8NFU0 473 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 ANGPTL6Q8NI99 470 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 MRGPRDQ8TDS7 321 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 PDCD6IPQ8WUM4 868 aaKnown RBP4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 C9orf72Q96LT7 481 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SORCS2Q96PQ0 1159 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 LGMNQ99538 433 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SYT11Q9BT88 431 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 PRRG3Q9BZD7 231 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 OPN3Q9H1Y3 402 aaPredicted RBP4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SP140LQ9H930 580 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 CAB39LQ9H9S4 337 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 PLCXD1Q9NUJ7 323 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 SPRR3Q9UBC9 169 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 RNF24Q9Y225 148 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 CPQQ9Y646 472 aa4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 V9GYY5 206 aaPredicted RBP4.24□□□□□ -1.73
TM9SF3-202ENST00000443638 CDHR2Q9BYE9 1310 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 MEIOCA2RUB1 952 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 FAM220BPB1ANY3 271 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 TFECO14948 347 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 NOL4O94818 638 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CCNB2O95067 398 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CD160O95971 181 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 FSHBP01225 129 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 IFNW1P05000 195 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 PRPS2P11908 318 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CTRB1P17538 263 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 OXTRP30559 389 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CCKARP32238 428 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 FOXN2P32314 431 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 SPRP35270 261 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 NBL1P41271 181 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 HTR2BP41595 481 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 PSMD4P55036 377 aaKnown RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 ERVPABLB-1P60509 514 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 GNB1P62873 340 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 MRPS11P82912 194 aaKnown RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 PAX2Q02962 417 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 SERTAD2Q14140 314 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 VWA2Q5GFL6 755 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 PPM1LQ5SGD2 360 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 VAX1Q5SQQ9 334 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 C6orf183Q5T699 404 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 GPR107Q5VW38 600 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CTRB2Q6GPI1 263 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 RBM45Q8IUH3 476 aaKnown RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 PIANPQ8IYJ0 282 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 FAM9CQ8IZT9 166 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 TTC29Q8NA56 475 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 INO80EQ8NBZ0 244 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 PIH1D2Q8WWB5 315 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CAPSLQ8WWF8 208 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 MRGPRFQ96AM1 343 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 ARL5BQ96KC2 179 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 MS4A4EQ96PG1 132 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 MEIS3Q99687 375 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CCDC28BQ9BUN5 200 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CHID1Q9BWS9 393 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 DGCR6LQ9BY27 220 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 ACTR3CQ9C0K3 210 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 CWH43Q9H720 699 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 PLEKHH1Q9ULM0 1364 aa4.23□□□□□ -1.73
TM9SF3-202ENST00000443638 AKNAQ7Z591 1439 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 DCTN6O00399 190 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 GPX5O75715 221 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 FGFR1OPO95684 399 aaKnown RBP4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 IGHV2-5P01817 119 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 ZSCAN5DPP0CG00 497 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 NR2C1P13056 603 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 CALCRP30988 508 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 TNFSF9P41273 254 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 GSK3BP49841 420 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 SNRPD1P62314 119 aaKnown RBP4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 ERVK-25P63136 954 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 CYTH1Q15438 398 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 PSG3Q16557 428 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 MOGAT2Q3SYC2 334 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 UFSP1Q6NVU6 142 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 LINC00469Q8N7U9 141 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 AQP11Q8NBQ7 271 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 LYPD6BQ8NI32 183 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 PYROXD1Q8WU10 500 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 ANP32BQ92688 251 aaKnown RBP4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 DUS3LQ96G46 650 aaKnown RBP4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 SEC22AQ96IW7 307 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 FOXN4Q96NZ1 517 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 TRNT1Q96Q11 434 aaKnown RBP4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 OR8B4Q96RC9 309 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 SH3GL1Q99961 368 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 HINT2Q9BX68 163 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 TMEM59Q9BXS4 323 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 MRPL47Q9HD33 250 aaKnown RBP4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 STX18Q9P2W9 335 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms