RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ZNF613Q6PF04 617 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 KLHL17Q6TDP4 642 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 TMEM108Q6UXF1 575 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 ABHD12BQ7Z5M8 362 aaPredicted RBP18.5■□□□□ 0.55
CDKN3-204ENST00000442975 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
CDKN3-204ENST00000442975 OR4D11Q8NGI4 311 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 C1QTNF6Q9BXI9 259 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 ASPNQ9BXN1 380 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 USP22Q9UPT9 525 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 M0R1B8 84 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 SLC22A2O15244 555 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 NPPAP01160 153 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 C8BP07358 591 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 PTH2RP49190 550 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 SPOCK1Q08629 439 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 HIKESHIQ53FT3 197 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 ENTPD8Q5MY95 495 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 H1FNTQ75WM6 255 aaPredicted RBP18.49■□□□□ 0.55
CDKN3-204ENST00000442975 YTHDF3Q7Z739 585 aaKnown RBP18.49■□□□□ 0.55
CDKN3-204ENST00000442975 CALHM3Q86XJ0 350 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 LRRC75A-AS1Q8N1F1 130 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 C17orf78Q8N4C9 275 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 LILRB1Q8NHL6 650 aaPredicted RBP18.49■□□□□ 0.55
CDKN3-204ENST00000442975 RASSF5Q8WWW0 418 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 PROX1Q92786 737 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 MUS81Q96NY9 551 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 FAM107BQ9H098 131 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 SLC17A5Q9NRA2 495 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 B3GAT1Q9P2W7 334 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 B3GALT5Q9Y2C3 310 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 ZNF469Q96JG9 3925 aaPredicted RBP18.49■□□□□ 0.55
CDKN3-204ENST00000442975 ROS1P08922 2347 aa18.49■□□□□ 0.55
CDKN3-204ENST00000442975 LRRN3E7EW58 273 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 KPNA4O00629 521 aaPredicted RBP18.48■□□□□ 0.55
CDKN3-204ENST00000442975 CHP2O43745 196 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 CRYBA2P53672 197 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 RPS4XP62701 263 aaKnown RBP18.48■□□□□ 0.55
CDKN3-204ENST00000442975 SLC25A3Q00325 362 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 MFSD13AQ14CX5 517 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 LRRC23Q53EV4 343 aaPredicted RBP18.48■□□□□ 0.55
CDKN3-204ENST00000442975 ERICH5Q6P6B1 374 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 OXGR1Q96P68 337 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 MOGAT1Q96PD6 335 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 TMEM43Q9BTV4 400 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 AMBRA1Q9C0C7 1298 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 POU2F3Q9UKI9 436 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 SLC7A7Q9UM01 511 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 RCE1Q9Y256 329 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 AMDHD2Q9Y303 409 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 CORINQ9Y5Q5 1042 aa18.48■□□□□ 0.55
CDKN3-204ENST00000442975 FLNAP21333 2647 aaKnown RBP18.47■□□□□ 0.55
CDKN3-204ENST00000442975 OR6C65A6NJZ3 312 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 ATP8B1O43520 1251 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 AKAP8O43823 692 aaKnown RBP18.47■□□□□ 0.55
CDKN3-204ENST00000442975 CCDC22O60826 627 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 FZD7O75084 574 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 SLC43A1O75387 559 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 UPK3AO75631 287 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 SERPINI2O75830 405 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 BGLAPP02818 100 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 SOD3P08294 240 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 TNFRSF1BP20333 461 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 PMS2P3Q13401 168 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 HMBOX1Q6NT76 420 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 SLC22A25Q6T423 547 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 WDR88Q6ZMY6 472 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 CCDC80Q76M96 950 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 UEVLDQ8IX04 471 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 WDR31Q8NA23 367 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 ADPRHL1Q8NDY3 354 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 OR2T12Q8NG77 320 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 ADAMTS16Q8TE57 1224 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 SMAP2Q8WU79 429 aaPredicted RBP18.47■□□□□ 0.55
CDKN3-204ENST00000442975 GTPBP3Q969Y2 492 aaKnown RBP18.47■□□□□ 0.55
CDKN3-204ENST00000442975 GSX2Q9BZM3 304 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 SH3GLB1Q9Y371 365 aa18.47■□□□□ 0.55
CDKN3-204ENST00000442975 MAGED1Q9Y5V3 778 aaPredicted RBP18.47■□□□□ 0.55
CDKN3-204ENST00000442975 TRAPPC13A5PLN9 417 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 FAM220BPB1ANY3 271 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 SHISA9B4DS77 424 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 TRAF3IP2O43734 574 aaPredicted RBP18.46■□□□□ 0.55
CDKN3-204ENST00000442975 CD40P25942 277 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 ROR2Q01974 943 aaKnown RBP18.46■□□□□ 0.55
CDKN3-204ENST00000442975 POU3F1Q03052 451 aaPredicted RBP18.46■□□□□ 0.55
CDKN3-204ENST00000442975 CARD17Q5XLA6 110 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 DEF8Q6ZN54 512 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 LINGO2Q7L985 606 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 SPATA21Q7Z572 469 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 CARM1Q86X55 608 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 SCAIQ8N9R8 606 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 OR6S1Q8NH40 331 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 IGFBPL1Q8WX77 278 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 Q96MF0 132 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 ZNF583Q96ND8 569 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 DLL4Q9NR61 685 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 CISD1Q9NZ45 108 aaKnown RBP18.46■□□□□ 0.55
CDKN3-204ENST00000442975 BAG5Q9UL15 447 aa18.46■□□□□ 0.55
CDKN3-204ENST00000442975 PRR14LQ5THK1 2151 aa18.45■□□□□ 0.54
CDKN3-204ENST00000442975 SHOX2O60902 331 aaPredicted RBP18.45■□□□□ 0.54
CDKN3-204ENST00000442975 WNT11O96014 354 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms