RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TAS2R1Q9NYW7 299 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ACTR3BQ9P1U1 418 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 B3GAT1Q9P2W7 334 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 PRSS50Q9UI38 385 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 RCE1Q9Y256 329 aa13.3□□□□□ -0.28
CSNK1E-210ENST00000442216 CELSR2Q9HCU4 2923 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 A6NNC1 897 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 MS4A18H0YCH9 400 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 AKAP8O43823 692 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 UBOX5O94941 541 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 PRSS23O95084 383 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 NQO1P15559 274 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 EDNRAP25101 427 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 PUDPQ08623 228 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 PMS2P3Q13401 168 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 TRAM2Q15035 370 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 MS4A18Q3C1V0 323 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 PXKQ7Z7A4 578 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 EPHX4Q8IUS5 362 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 C10orf53Q8N6V4 93 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 POMGNT2Q8NAT1 580 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 TMEM255BQ8WV15 326 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 LIPHQ8WWY8 451 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 KISS1RQ969F8 398 aaPredicted RBP13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 PYURFQ96I23 114 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 ZNF385AQ96PM9 386 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 MED18Q9BUE0 208 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 ASB6Q9NWX5 421 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 MED31Q9Y3C7 131 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 ENPP4Q9Y6X5 453 aa13.29□□□□□ -0.28
CSNK1E-210ENST00000442216 PLPP3O14495 311 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 FFAR1O14842 300 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 CTAG2O75638 210 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 CH25HO95992 272 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 SEMG1P04279 462 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 ASAH2BP0C7U1 165 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 ITGA2P17301 1181 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 RHCEP18577 417 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 CBLP22681 906 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 CRYGSP22914 178 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 UGT2B15P54855 530 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 ZP4Q12836 540 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 C1DQ13901 141 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 TRIM25Q14258 630 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 C1QTNF12Q5T7M4 302 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 ABHD12BQ7Z5M8 362 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 P2RY8Q86VZ1 359 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 UEVLDQ8IX04 471 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 RNF113BQ8IZP6 322 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 UBE2J2Q8N2K1 259 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 C7orf34Q96L11 122 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 ACTR6Q9GZN1 396 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 SLCO5A1Q9H2Y9 848 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 TAS2R16Q9NYV7 291 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 UPB1Q9UBR1 384 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 SEC14L4Q9UDX3 406 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 FAM32AQ9Y421 112 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 NOX1Q9Y5S8 564 aa13.28□□□□□ -0.28
CSNK1E-210ENST00000442216 CENPEQ02224 2701 aa13.27□□□□□ -0.28
CSNK1E-210ENST00000442216 ENO4A6NNW6 628 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 CYSRT1A8MQ03 144 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 LRRN3E7EW58 273 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 J3KTA2 159 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 PDLIM1O00151 329 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 KPNA4O00629 521 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 TRAF3IP2O43734 574 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 ZNF432O94892 652 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 OR6A2O95222 327 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 HIST1H2ABP04908 130 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 PTNP21246 168 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 IGHV1-2P23083 117 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 IL32P24001 234 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 YAP1P46937 504 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 DNAL1Q4LDG9 190 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 TSPO2Q5TGU0 170 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 OR7E24Q6IFN5 339 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 LCN8Q6JVE9 175 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 HIST3H2AQ7L7L0 130 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 BHLHA15Q7RTS1 189 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 SLC46A3Q7Z3Q1 461 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 TSEN54Q7Z6J9 526 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 KDM8Q8N371 416 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 ZNF433Q8N7K0 673 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 PIK3C3Q8NEB9 887 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 ACOT11Q8WXI4 607 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 HSD17B8Q92506 261 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 HIST1H2ACQ93077 130 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 SGTBQ96EQ0 304 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 LINC00470Q9BZP3 86 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 RASSF1Q9NS23 344 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 SLC7A10Q9NS82 523 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 MAN2C1Q9NTJ4 1040 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 NDUFAF4Q9P032 175 aa13.27□□□□□ -0.29
CSNK1E-210ENST00000442216 A0A1W2PRQ8 180 aa13.26□□□□□ -0.29
CSNK1E-210ENST00000442216 GYG2O15488 501 aa13.26□□□□□ -0.29
CSNK1E-210ENST00000442216 OR7A10O76100 309 aa13.26□□□□□ -0.29
CSNK1E-210ENST00000442216 HPRP00739 348 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms