RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZNF527Q8NB42 609 aa12.95□□□□□ -0.34
LIMD1-202ENST00000440097 IRGMA1A4Y4 181 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 C7orf66A4D0T2 115 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 FAM86C2PA6NEL3 165 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 SLC19A2O60779 497 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 REM1O75628 298 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF81P51508 661 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 BIKQ13323 160 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 LPAL2Q16609 132 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 LUZP2Q86TE4 346 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 CEP76Q8TAP6 659 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 SCMH1Q96GD3 660 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 THAP7Q9BT49 309 aaPredicted RBP12.94□□□□□ -0.34
LIMD1-202ENST00000440097 HINT3Q9NQE9 182 aaKnown RBP12.94□□□□□ -0.34
LIMD1-202ENST00000440097 COPS7AQ9UBW8 275 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 CTSFQ9UBX1 484 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 SUSD2Q9UGT4 822 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 A6NIN4 97 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 SOCS6O14544 535 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 DVL2O14641 736 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 BET1O15155 118 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 SIGLEC6O43699 453 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 LYPD3O95274 346 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 IFNA7P01567 189 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 CELP19835 753 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 BTCP35070 178 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 NR0B2Q15466 257 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 LGALSLQ3ZCW2 172 aaPredicted RBP12.94□□□□□ -0.34
LIMD1-202ENST00000440097 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 TMEM91Q6ZNR0 172 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 TMPRSS9Q7Z410 1059 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 PRSS42Q7Z5A4 293 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 MRGPREQ86SM8 312 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 OR51G2Q8NGK0 314 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 OR2I1PQ8NGU4 316 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 OR4C6Q8NH72 309 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 BRIX1Q8TDN6 353 aaKnown RBP12.94□□□□□ -0.34
LIMD1-202ENST00000440097 RFT1Q96AA3 541 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF501Q96CX3 271 aaPredicted RBP12.94□□□□□ -0.34
LIMD1-202ENST00000440097 SLC46A1Q96NT5 459 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 KCNN2Q9H2S1 579 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 CLEC4MQ9H2X3 399 aaPredicted RBP12.94□□□□□ -0.34
LIMD1-202ENST00000440097 CDCP1Q9H5V8 836 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 UBQLN2Q9UHD9 624 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 RABL2BQ9UNT1 228 aa12.94□□□□□ -0.34
LIMD1-202ENST00000440097 KDM4EB2RXH2 506 aaPredicted RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 FXYD6P3P58550 94 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 ELAVL1Q15717 326 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 IDNKQ5T6J7 187 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 TMEM71Q6P5X7 295 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 IL20RBQ6UXL0 311 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 HDDC2Q7Z4H3 204 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 EID2Q8N6I1 236 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 EDAQ92838 391 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 DAZLQ92904 295 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 OR6C1Q96RD1 312 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 OR51V1Q9H2C8 321 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 OR51J1Q9H342 316 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF768Q9H5H4 540 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 GAREM1Q9H706 876 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 MKKSQ9NPJ1 570 aaPredicted RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 ENAMQ9NRM1 1142 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 UBQLN4Q9NRR5 601 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 MED17Q9NVC6 651 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 SIGLEC7Q9Y286 467 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 EXOSC1Q9Y3B2 195 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 ZC3H12DA2A288 527 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 CLPSP04118 112 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 NGFRP08138 427 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 RRASP10301 218 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 IL12BP29460 328 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 PPICP45877 212 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 NR0B1P51843 470 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 NTRK2Q16620 822 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 TMEM44Q2T9K0 475 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 RPL13AP3Q6NVV1 102 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 TMPRSS11FQ6ZWK6 438 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 KMT5CQ86Y97 462 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 C10orf53Q8N6V4 93 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 BMPERQ8N8U9 685 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 ZNF485Q8NCK3 441 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 LCORQ96JN0 433 aaPredicted RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 RBP7Q96R05 134 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 TNFRSF13CQ96RJ3 184 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 TBX5Q99593 518 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 VN1R1Q9GZP7 353 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 LIN7BQ9HAP6 207 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 MRPS18AQ9NVS2 196 aaKnown RBP12.93□□□□□ -0.34
LIMD1-202ENST00000440097 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
LIMD1-202ENST00000440097 LRRN3E7EW58 273 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 NPIPB9F8W1W9 429 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 EEF1E1O43324 174 aaKnown RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 CFDP00746 253 aaPredicted RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 HLA-DPB1P04440 258 aa12.92□□□□□ -0.34
LIMD1-202ENST00000440097 HOXD4P09016 255 aaPredicted RBP12.92□□□□□ -0.34
LIMD1-202ENST00000440097 SRP9P49458 86 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms