RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 ADGRG3Q86Y34 549 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 SDR9C7Q8NEX9 313 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 CHCHD6Q9BRQ6 235 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 ZNF649Q9BS31 505 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 SPRY4Q9C004 299 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 FKRPQ9H9S5 495 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 TOR4AQ9NXH8 423 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 FBXL4Q9UKA2 621 aa13.54□□□□□ -0.24
IFT140-204ENST00000439987 KNTC1P50748 2209 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 ITGA10O75578 1167 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 MT-CO3P00414 261 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 CLUP10909 449 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 TCN2P20062 427 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 HTR3AP46098 478 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 SLC16A1P53985 500 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 ERVK-25P63136 954 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.53□□□□□ -0.24
IFT140-204ENST00000439987 ALG10Q5BKT4 473 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 NDUFAF7Q7L592 441 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 LRRC75AQ8NAA5 344 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 OR6F1Q8NGZ6 308 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 ST8SIA1Q92185 356 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 MED30Q96HR3 178 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 KLHL1Q9NR64 748 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 ERVK13-1Q9NX77 482 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 MED11Q9P086 117 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 CRNNQ9UBG3 495 aaPredicted RBP13.53□□□□□ -0.24
IFT140-204ENST00000439987 TCFL5Q9UL49 500 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 PCDHGA1Q9Y5H4 931 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 NSG1A0A0A6YYJ2 146 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 A0A1W2PNU3 283 aaPredicted RBP13.53□□□□□ -0.24
IFT140-204ENST00000439987 TMEM72A0PK05 275 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 C9orf172C9J069 976 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 NPIPB7O75200 414 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 BGLAPP02818 100 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 TSPAN19P0C672 248 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 PTGDSP41222 190 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 GNG2P59768 71 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 SMUG1Q53HV7 270 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 C1QL3Q5VWW1 255 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 ZNF485Q8NCK3 441 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 CT55Q8WUE5 264 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 GATAD2BQ8WXI9 593 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 TM9SF4Q92544 642 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 CENPOQ9BU64 300 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 METTL7AQ9H8H3 244 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 NDUFB11Q9NX14 153 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
IFT140-204ENST00000439987 GRIP1Q9Y3R0 1128 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
IFT140-204ENST00000439987 PCNX2A6NKB5 2137 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 CCDC187A0A096LP49 1063 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 CENPXA8MT69 81 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 A8MVM7 634 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 HIST1H2ABP04908 130 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 GYPBP06028 91 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 CD14P08571 375 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 RAB40ALP0C0E4 278 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 SPNP16150 400 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 PRKCAP17252 672 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 RPS18P62269 152 aaKnown RBP13.52□□□□□ -0.24
IFT140-204ENST00000439987 EIF3IQ13347 325 aaKnown RBP13.52□□□□□ -0.24
IFT140-204ENST00000439987 CDK10Q15131 360 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 ZNF791Q3KP31 576 aaPredicted RBP13.52□□□□□ -0.24
IFT140-204ENST00000439987 SOWAHCQ53LP3 525 aaPredicted RBP13.52□□□□□ -0.24
IFT140-204ENST00000439987 LIPKQ5VXJ0 399 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 DHRS13Q6UX07 377 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 HIST3H2AQ7L7L0 130 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 PHC2Q8IXK0 858 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 PARP16Q8N5Y8 322 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 ACBD7Q8N6N7 88 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 OR9Q1Q8NGQ5 310 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 GRPEL2Q8TAA5 225 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 HIST1H2ACQ93077 130 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 ARHGAP9Q9BRR9 750 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 PTDSS2Q9BVG9 487 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 C6orf62Q9GZU0 229 aaPredicted RBP13.52□□□□□ -0.24
IFT140-204ENST00000439987 ZNF160Q9HCG1 818 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 ISYNA1Q9NPH2 558 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 HAO2Q9NYQ3 351 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 PPP4R1LQ9P1A2 415 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 WIF1Q9Y5W5 379 aa13.52□□□□□ -0.24
IFT140-204ENST00000439987 LOC110117498-PIK3R3F6TDL0 507 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 APEHP13798 732 aaKnown RBP13.52□□□□□ -0.25
IFT140-204ENST00000439987 CPEP16870 476 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 CD79BP40259 229 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 MRPS15P82914 257 aaKnown RBP13.52□□□□□ -0.25
IFT140-204ENST00000439987 RPL18Q07020 188 aaKnown RBP13.52□□□□□ -0.25
IFT140-204ENST00000439987 FAM209AQ5JX71 171 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 FAM122BQ7Z309 247 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 KLHL36Q8N4N3 616 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 NPEPL1Q8NDH3 523 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 KBTBD8Q8NFY9 601 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 RASD2Q96D21 266 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 NMNAT3Q96T66 252 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 SDHAF3Q9NRP4 125 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 SLC6A5Q9Y345 797 aa13.52□□□□□ -0.25
IFT140-204ENST00000439987 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms