RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 C16orf87Q6PH81 154 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 DLEU7Q6UYE1 221 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 C16orf47Q6ZP98 133 aaPredicted RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 TMEM179Q6ZVK1 233 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 KCTD9Q7L273 389 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 GET4Q7L5D6 327 aaPredicted RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 LHFPL3Q86UP9 236 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 TPRA1Q86W33 373 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 VSIG1Q86XK7 387 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 EFCAB13Q8IY85 973 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 PRSS58Q8IYP2 241 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 ZNF679Q8IYX0 411 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 MREGQ8N565 214 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 LSMEM1Q8N8F7 131 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 TMEM105Q8N8V8 129 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 SPANXA2-OT1Q8N9U9 137 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 CCNYQ8ND76 341 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 LPCAT1Q8NF37 534 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 NOXO1Q8NFA2 376 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 OR5AU1Q8NGC0 362 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 OR10A7Q8NGE5 316 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 OR56B4Q8NH76 319 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 COQ8AQ8NI60 647 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 PNPT1Q8TCS8 783 aaKnown RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 PAQR8Q8TEZ7 354 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 GIPC3Q8TF64 312 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 GEMIN6Q8WXD5 167 aaKnown RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 RAPGEF5Q92565 580 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 RPL3LQ92901 407 aaKnown RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 FGF14Q92915 247 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 EMG1Q92979 244 aaKnown RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 ZNF488Q96MN9 340 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 WFIKKN1Q96NZ8 548 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 ZNF649Q9BS31 505 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 TIMM29Q9BSF4 260 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 ZSCAN5AQ9BUG6 496 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 MRPL9Q9BYD2 267 aaKnown RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 GCOM2Q9BZD3 368 aaPredicted RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 ATG10Q9H0Y0 220 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 SYNDIG1Q9H7V2 258 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 UBE2ZQ9H832 354 aaPredicted RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 VCPKMTQ9H867 229 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 METTL7AQ9H8H3 244 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 WDR76Q9H967 626 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 MRPL47Q9HD33 250 aaKnown RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 NLE1Q9NVX2 485 aaPredicted RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 AATFQ9NY61 560 aaKnown RBP eCLIP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 SLC2A8Q9NY64 477 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 RDH8Q9NYR8 311 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 KCNIP1Q9NZI2 227 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 NFKBIL1Q9UBC1 381 aaPredicted RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 CLCF1Q9UBD9 225 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 TRIM10Q9UDY6 481 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 SHPKQ9UHJ6 478 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 FAM153AQ9UHL3 310 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 ATP6V1HQ9UI12 483 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 YARS2Q9Y2Z4 477 aaKnown RBP0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 CBY1Q9Y3M2 126 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 N6AMT1Q9Y5N5 214 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 CACNA1GO43497 2377 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 CLSPNQ9HAW4 1339 aa0.05□□□□□ -2.4
SUMO1P3-201ENST00000439961 ADAMTS13Q76LX8 1427 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 SDK2Q58EX2 2172 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 MYO16Q9Y6X6 1858 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 TRAV39A0A0B4J263 110 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 A0A0U1RQV1 116 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 A0A1B0GVI7 797 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 ANKRD30BLA7E2S9 258 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 HMGB1P1B2RPK0 211 aaPredicted RBP0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 C4orf51C9J302 202 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 NPIPA7E9PJI5 369 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 DDX39AO00148 427 aaKnown RBP0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 LGALS8O00214 317 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 DCTN6O00399 190 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 CLDN5O00501 218 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 FCN1O00602 326 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 XPO1O14980 1071 aaKnown RBP0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 TAPBPO15533 448 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 CHMP2AO43633 222 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 SH3BP5O60239 455 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 GCM2O75603 506 aaPredicted RBP0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 UPK3AO75631 287 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 RHOBTB1O94844 696 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 GABARAPO95166 117 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 KLHL2O95198 593 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 RAB3DO95716 219 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 OLFM2O95897 454 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 OPN1LWP04000 364 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 GAPDHP04406 335 aaKnown RBP0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 BCHEP06276 602 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 ANXA4P09525 319 aaPredicted RBP0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 ZNF688P0C7X2 276 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 ZNF735P0CB33 412 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 NPIPA8P0DM63 369 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 PRPS2P11908 318 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 FOLR1P15328 257 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 CBR1P16152 277 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 TCP1P17987 556 aaKnown RBP0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 CNR1P21554 472 aa0.04□□□□□ -2.4
SUMO1P3-201ENST00000439961 TBXA2RP21731 343 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms