RNA–Protein interactions for RNA: ENST00000439513.1

ATAD3A-206, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-206ENST00000439513 CLDN17P56750 224 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 TUBA1BP68363 451 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 TUBA4AP68366 448 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 DMTNQ08495 405 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 SCARB2Q14108 478 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 NRF1Q16656 503 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 TUBA1AQ71U36 451 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 PTOV1Q86YD1 416 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 DEPDC4Q8N2C3 294 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 ZNF417Q8TAU3 575 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 THOC1Q96FV9 657 aaKnown RBP12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 ZNF587Q96SQ5 575 aaPredicted RBP12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 LINC00470Q9BZP3 86 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 SEC61A2Q9H9S3 476 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 TMEM45AQ9NWC5 275 aa12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.55□□□□□ -0.4
ATAD3A-206ENST00000439513 CHD3Q12873 2000 aaKnown RBP12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 A0A096LPE4 126 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 A0A1W2PPZ6 126 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 H7C417 338 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 CRLF1O75462 422 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 KRT33AO76009 404 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 WNT11O96014 354 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 CBLP22681 906 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 GRPRP30550 384 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 NUDT6P53370 316 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 ROR2Q01974 943 aaKnown RBP12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 SELPLGQ14242 412 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 RUNDC3AQ59EK9 446 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 ALG10BQ5I7T1 473 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 FAM69AQ5T7M9 428 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 KLHL24Q6TFL4 600 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 ABHD12BQ7Z5M8 362 aaPredicted RBP12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 RETREG3Q86VR2 466 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 KRT73Q86Y46 540 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 WDFY1Q8IWB7 410 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 ZNF525Q8N782 197 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 DYDC1Q8WWB3 177 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 CKAP2Q8WWK9 683 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 SLC38A4Q969I6 547 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 ZNF837Q96EG3 531 aaPredicted RBP12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 ADAD1Q96M93 576 aaKnown RBP12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 SLC38A2Q96QD8 506 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 MDFIQ99750 246 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 FKRPQ9H9S5 495 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 OBP2BQ9NPH6 170 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 CRNNQ9UBG3 495 aaPredicted RBP12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 RPS6KB2Q9UBS0 482 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 RCE1Q9Y256 329 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 COL6A5A8TX70 2615 aa12.54□□□□□ -0.4
ATAD3A-206ENST00000439513 TRAV36DV7A0A075B6V5 113 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 A0A087WUJ7 227 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 ARPC4-TTLL3A0A0A6YYG9 625 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 A0A0B4J2E0 115 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 A0A1B0GX12 115 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 OR6C65A6NJZ3 312 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 MS4A18H0YCH9 400 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 AIM2O14862 343 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 TRAF3IP2O43734 574 aaPredicted RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 GPRIN2O60269 458 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 MFN2O95140 757 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 HPRP00739 348 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 HLA-DOBP13765 273 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 ZNF43P17038 809 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 SLC6A2P23975 617 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 PCBP3P57721 371 aaKnown RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 RGS8P57771 180 aaPredicted RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 OR1Q1Q15612 314 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 MS4A18Q3C1V0 323 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 FAM91A1Q658Y4 838 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 NHLRC1Q6VVB1 395 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 TMEM123Q8N131 208 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 HIPK4Q8NE63 616 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 MAGEE2Q8TD90 523 aaPredicted RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 STON2Q8WXE9 905 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 OR2M2Q96R28 347 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 RHNO1Q9BSD3 238 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 GPR35Q9HC97 309 aa12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
ATAD3A-206ENST00000439513 YLPM1P49750 1951 aaKnown RBP12.52□□□□□ -0.4
ATAD3A-206ENST00000439513 LOC102725191A0A1B0GVB3 256 aa12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 EVPLLA8MZ36 301 aa12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 HMGB1P1B2RPK0 211 aaPredicted RBP12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 LRRN3E7EW58 273 aa12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 RPL36A-HNRNPH2H7BZ11 118 aa12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 M0R3H8 397 aa12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 CD5LO43866 347 aa12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 OR2T1O43869 369 aa12.52□□□□□ -0.41
ATAD3A-206ENST00000439513 LY6HO94772 140 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms