RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 EPHX4Q8IUS5 362 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 ZNF295-AS1Q8N0V1 137 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 APH1AQ96BI3 265 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 HS6ST2Q96MM7 605 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 OXGR1Q96P68 337 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 BTBD10Q9BSF8 475 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 MAN2C1Q9NTJ4 1040 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 NDUFAF4Q9P032 175 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 B3GAT1Q9P2W7 334 aa17.24■□□□□ 0.35
SEMA3B-206ENST00000439487 ENO4A6NNW6 628 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 PIP5K1CO60331 668 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 DIRAS1O95057 198 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 HPRP00739 348 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 ADAP00813 363 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 MT-ATP6P00846 226 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 SEMG1P04279 462 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 PRF1P14222 555 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 CCKARP32238 428 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 PCYT1AP49585 367 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 LSM11P83369 360 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 POU4F3Q15319 338 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 ANKRD34AQ69YU3 496 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 STAC2Q6ZMT1 411 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 AAED1Q7RTV5 226 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 CXorf67Q86X51 503 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 DHFR2Q86XF0 187 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 GABRG1Q8N1C3 465 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 LRRC17Q8N6Y2 441 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 SCAIQ8N9R8 606 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 ADPRHL1Q8NDY3 354 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 TMEM45BQ96B21 275 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 CCDC124Q96CT7 223 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 MUC13Q9H3R2 512 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 FANCFQ9NPI8 374 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 C20orf141Q9NUB4 165 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 PARPBPQ9NWS1 579 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 MRPL39Q9NYK5 338 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 KCNN3Q9UGI6 736 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 MED31Q9Y3C7 131 aa17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 FAM32AQ9Y421 112 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-206ENST00000439487 PLPP3O14495 311 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 UMPSP11172 480 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 ZNF43P17038 809 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 TSC22D1Q15714 1073 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 IQCCQ4KMZ1 466 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 LCN8Q6JVE9 175 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 SLC46A3Q7Z3Q1 461 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 UBE2J2Q8N2K1 259 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 PIK3C3Q8NEB9 887 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 OR5J2Q8NH18 312 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 SGTBQ96EQ0 304 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 FKRPQ9H9S5 495 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 SLC24A3Q9HC58 644 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 NANSQ9NR45 359 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 AKAP6Q13023 2319 aa17.22■□□□□ 0.35
SEMA3B-206ENST00000439487 APCP25054 2843 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 NOTCH2Q04721 2471 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 TCRBV5S2A0A599 114 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 SH3D21A4FU49 640 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 HLA-DOBP13765 273 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 RHCEP18577 417 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 CLDN17P56750 224 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 C1DQ13901 141 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 FBXW9Q5XUX1 488 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 TBPL2Q6SJ96 375 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 Q6ZT83 130 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 FAM222BQ8WU58 562 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 MCUR1Q96AQ8 359 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 ASB9Q96DX5 294 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 WFIKKN1Q96NZ8 548 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 SEPHS2Q99611 448 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 NMNAT1Q9HAN9 279 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 NDRG3Q9UGV2 375 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 ZNF229Q9UJW7 825 aa17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 HEATR1Q9H583 2144 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-206ENST00000439487 LOC102725191A0A1B0GVB3 256 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 C11orf98E9PRG8 122 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 DNAJC8O75937 253 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 OR7A10O76100 309 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 OR6A2O95222 327 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 HIST1H2ABP04908 130 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 H1F0P07305 194 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 ASAH2BP0C7U1 165 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 ADORA3P0DMS8 318 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 EPXP11678 715 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 IFI30P13284 250 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 ITGA2P17301 1181 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 FUT1P19526 365 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 IGHV1-2P23083 117 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 AHCYP23526 432 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 SELENOPP49908 381 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 CBX1P83916 185 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 PUDPQ08623 228 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 MTX3Q5HYI7 312 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 SFRP5Q5T4F7 317 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 TSPO2Q5TGU0 170 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 NIPAL3Q6P499 406 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 PGM2L1Q6PCE3 622 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 C22orf34Q6ZV56 151 aa17.2■□□□□ 0.34
SEMA3B-206ENST00000439487 HIST3H2AQ7L7L0 130 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms