RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TDRD6O60522 2096 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 A0A0C4DFX4 3053 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 A0A087WUJ7 227 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 FAM221BA6H8Z2 402 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 OR6C68A6NDL8 312 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 G3V3Q6 166 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 GABARAPH6UMI1 98 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 GMDSO60547 372 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 PRAF2O60831 178 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ITGA10O75578 1167 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 PPM1BO75688 479 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 TGM6O95932 706 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 HPXP02790 462 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 RPL4P36578 427 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 CCR5P51681 352 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 VSX2P58304 361 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 IL10RAQ13651 578 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ELFN2Q5R3F8 820 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 HES5Q5TA89 166 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 Q6ZSR6 202 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 RADILQ96JH8 1075 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 SLC25A18Q9H1K4 315 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 NANSQ9NR45 359 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 POT1Q9NUX5 634 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF281Q9Y2X9 895 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 HS3ST3A1Q9Y663 406 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 LRP4O75096 1905 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 CACNA1IQ9P0X4 2223 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 IGHV1OR15-9A0A0B4J2B8 117 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 NAP1L6A6NFF2 107 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 C19orf67A6NJJ6 358 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 EFCAB7A8K855 629 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 PRAMEF26H0Y7S4 382 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 IMPA2O14732 288 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF217O75362 1048 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ECDO95905 644 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 EPHA4P54764 986 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 RPS4XP62701 263 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ILF3Q12906 894 aaKnown RBP eCLIP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF684Q5T5D7 378 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 GPR139Q6DWJ6 353 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 NPSR1Q6W5P4 371 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 OR8H3Q8N146 312 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 EID2Q8N6I1 236 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 PATE1Q8WXA2 126 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 RGP1Q92546 391 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 RNF166Q96A37 237 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 NXPE2Q96DL1 559 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 GPX7Q96SL4 187 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF436Q9C0F3 470 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 SPRTNQ9H040 489 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 STARD5Q9NSY2 213 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 GLTPQ9NZD2 209 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF337Q9Y3M9 751 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 LAMA1P25391 3075 aa14.98□□□□□ -0.01
CLCNKA-203ENST00000439316 NCOR1O75376 2440 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 RPS10-NUDT3A0A1W2PQS6 291 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 ACOD1A6NK06 481 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 PRR32B1ATL7 298 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 OR7A10O76100 309 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 MPC2O95563 127 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF81P51508 661 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 PSMD4P55036 377 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 NANOS3P60323 173 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 YPEL5P62699 121 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 NDUFAF6Q330K2 333 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 TMEM255AQ5JRV8 349 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 SLC35F3Q8IY50 421 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 OR13H1Q8NG92 308 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 OR6C4Q8NGE1 309 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 OR6K6Q8NGW6 343 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 OR52I2Q8NH67 350 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 RASD2Q96D21 266 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 ORAI1Q96D31 301 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 LCORQ96JN0 433 aaPredicted RBP14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 BEX1Q9HBH7 125 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 MRPL15Q9P015 296 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 KLHL9Q9P2J3 617 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 CPNE7Q9UBL6 633 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 DTX4Q9Y2E6 619 aa14.97□□□□□ -0.01
CLCNKA-203ENST00000439316 A0A1B0GUH1 482 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 IDSB3KWA1 339 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 HCRTR1O43613 425 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 KRT33AO76009 404 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 GLCEO94923 617 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 PSMB1P20618 241 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 SELENOPP49908 381 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 AP3S2P59780 193 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 UBE2IP63279 158 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 SNTA1Q13424 505 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 GXYLT1Q4G148 440 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 LINC01590Q5TEZ4 76 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 OLFML2AQ68BL7 652 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 SFRP4Q6FHJ7 346 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 NLRC3Q7RTR2 1065 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 ARHGEF39Q8N4T4 335 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 RCBTB1Q8NDN9 531 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 FAM71CQ8NEG0 241 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 OR9A4Q8NGU2 314 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 GCDHQ92947 438 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms