RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HACD2Q6Y1H2 254 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 TREML1Q86YW5 311 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 C17orf78Q8N4C9 275 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 C10orf53Q8N6V4 93 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 MPP4Q96JB8 637 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 PIP5K1AQ99755 562 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 POLR2J2Q9GZM3 115 aaKnown RBP21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 POLR2J3Q9H1A7 115 aaKnown RBP21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 MYLK2Q9H1R3 596 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 CMTM6Q9NX76 183 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 USP22Q9UPT9 525 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 RCE1Q9Y256 329 aa21.77■■□□□ 1.08
RAPGEF1-206ENST00000438647 LOC102725191A0A1B0GVB3 256 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 AKAP8O43823 692 aaKnown RBP21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 MT-ATP6P00846 226 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 HOXC12P31275 282 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 KDELR2P33947 212 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 NUDT2P50583 147 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 GNGT1P63211 74 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 IL1RL1Q01638 556 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 NIPAL3Q6P499 406 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 TTC33Q6PID6 262 aaPredicted RBP21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 SEZ6L2Q6UXD5 910 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 LINC00114Q6XXX2 140 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 CARM1Q86X55 608 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC15A3Q8IY34 581 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 KDM8Q8N371 416 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC41A3Q96GZ6 507 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 CCL19Q99731 98 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 AMBRA1Q9C0C7 1298 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 B3GAT1Q9P2W7 334 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 SEC14L4Q9UDX3 406 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 F8P00451 2351 aa21.76■■□□□ 1.07
RAPGEF1-206ENST00000438647 ZNF587BE7ETH6 402 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 BGLAPP02818 100 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 CBLP22681 906 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 PRDX6P30041 224 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 SELENOPP49908 381 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 CLDN17P56750 224 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 CYBRD1Q53TN4 286 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 OR52N5Q8NH56 324 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 LZICQ8WZA0 190 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC19A3Q9BZV2 496 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 MRPL39Q9NYK5 338 aaKnown RBP21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC7A7Q9UM01 511 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 ROS1P08922 2347 aa21.75■■□□□ 1.07
RAPGEF1-206ENST00000438647 DYNC1I1O14576 645 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 HS3ST1O14792 307 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 CLOCKO15516 846 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 PLAUP00749 431 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC7A2P52569 658 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 FOXG1P55316 489 aaPredicted RBP21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 LIPEQ05469 1076 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 BSPH1Q075Z2 132 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 PMS2P3Q13401 168 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 C9orf135Q5VTT2 229 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 ADAM5Q6NVV9 412 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 KLHL17Q6TDP4 642 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 UEVLDQ8IX04 471 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 LINC00470Q9BZP3 86 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 AMDHD2Q9Y303 409 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 MAGED1Q9Y5V3 778 aaPredicted RBP21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC25A15Q9Y619 301 aa21.74■■□□□ 1.07
RAPGEF1-206ENST00000438647 PRRC2AP48634 2157 aaKnown RBP21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC43A1O75387 559 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 PTNP21246 168 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 GYS2P54840 703 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 TAS2R41P59536 307 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 PUDPQ08623 228 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 C8orf82Q6P1X6 216 aaPredicted RBP21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 KLHL24Q6TFL4 600 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 TMEM108Q6UXF1 575 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 ZNF611Q8N823 705 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 AKAP1Q92667 903 aaKnown RBP eCLIP21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 MOGAT1Q96PD6 335 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 ALG2Q9H553 416 aa21.73■■□□□ 1.07
RAPGEF1-206ENST00000438647 DPRXA6NFQ7 191 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 NME4O00746 187 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 SMPD2O60906 423 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 OR5F1O95221 314 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 LYPD3O95274 346 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 THY1P04216 161 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 SELENOWP63302 87 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 LTBQ06643 244 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 WDR88Q6ZMY6 472 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 DEF8Q6ZN54 512 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 OR5J2Q8NH18 312 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 BOD1Q96IK1 185 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 TPD52L3Q96J77 140 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 RADILQ96JH8 1075 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 ALKBH3Q96Q83 286 aaPredicted RBP21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 ZNF426Q9BUY5 554 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 SLC17A5Q9NRA2 495 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 NPAP1Q9NZP6 1156 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 NOX1Q9Y5S8 564 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 HIVEP1P15822 2718 aa21.72■■□□□ 1.07
RAPGEF1-206ENST00000438647 MS4A18H0YCH9 400 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 GSTA4O15217 222 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 TRAF3IP2O43734 574 aaPredicted RBP21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 TMCC2O75069 709 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms