RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 HSD3B1P14060 373 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ZNF12P17014 697 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ATP6V1C1P21283 382 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 CRYBB2P43320 205 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 C21orf62-AS1Q17RA5 79 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 GLIPR1L2Q4G1C9 344 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PDZK1Q5T2W1 519 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PAQR6Q6TCH4 344 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 C9orf139Q6ZV77 190 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ABHD12BQ7Z5M8 362 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 OR9K2Q8NGE7 335 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ZNF483Q8TF39 744 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TSPAN32Q96QS1 320 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 LAT2Q9GZY6 243 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 HOXD1Q9GZZ0 328 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 VPS11Q9H270 941 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TMEM181Q9P2C4 612 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 NFU1Q9UMS0 254 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 POLR3HQ9Y535 204 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 A0A096LPK6 155 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 A0A1W2PPW3 197 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 HMX2A2RU54 273 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SRRM5B3KS81 715 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PGRMC1O00264 195 aaKnown RBP10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PIP5K1CO60331 668 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 BCAS1O75363 584 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 HSPA4LO95757 839 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TCP1P17987 556 aaKnown RBP10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 EFNA1P20827 205 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 CASQ1P31415 396 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 GLRXP35754 106 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ARR3P36575 388 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ARF1P84077 181 aaKnown RBP10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ZNF385BQ569K4 471 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 USP51Q70EK9 711 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PARP8Q8N3A8 854 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 OR52E2Q8NGJ4 325 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 KIF18AQ8NI77 898 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PYROXD1Q8WU10 500 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 EGLN2Q96KS0 407 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SERHL2Q9H4I8 314 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 NECAP2Q9NVZ3 263 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 KCNE5Q9UJ90 142 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 INSIG2Q9Y5U4 225 aa10.38□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 HYDINQ4G0P3 5121 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ISPDA4D126 451 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 C17orf100A8MU93 164 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 CLDN25C9JDP6 229 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ULK1O75385 1050 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 FOXH1O75593 365 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 CLPTM1O96005 669 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 KRT6AP02538 564 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 KRT6BP04259 564 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 HMGN2P05204 90 aaKnown RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 UBTFL6P0CB48 400 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ZNF35P13682 527 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 GSTM5P46439 218 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 KRT6CP48668 564 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SEC61A1P61619 476 aaKnown RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SLC35A1P78382 337 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ROR2Q01974 943 aaKnown RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 COL10A1Q03692 680 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 LASP1Q14847 261 aaKnown RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PDCD1Q15116 288 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 DCST2Q5T1A1 773 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 LINC00114Q6XXX2 140 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 OLIG3Q7RTU3 272 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TMEM99Q8N816 258 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ACTRT1Q8TDG2 376 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ST7LQ8TDW4 575 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TMEM234Q8WY98 164 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SGCDQ92629 289 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 RAB1CQ92928 201 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ZNF317Q96PQ6 595 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 NAA11Q9BSU3 229 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 MRI1Q9BV20 369 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TRIM31Q9BZY9 425 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PIGUQ9H490 435 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 DUSP22Q9NRW4 184 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SIRT5Q9NXA8 310 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 GRHL1Q9NZI5 618 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TRAPPC4Q9Y296 219 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SPIN1Q9Y657 262 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SAR1BQ9Y6B6 198 aa10.37□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ZC3H12DA2A288 527 aaKnown RBP10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 EIF1BO60739 113 aaKnown RBP10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SEC31AO94979 1220 aaKnown RBP10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 AKR7A3O95154 331 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PLATP00750 562 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 HSD17B3P37058 310 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 CAPZA2P47755 286 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 NKPD1Q17RQ9 610 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TM4SF20Q53R12 229 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 SPDYAQ5MJ70 313 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 MROH9Q5TGP6 573 aa10.36□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 NIPAL3Q6P499 406 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms