RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 ADPRHL1Q8NDY3 354 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 GEMIN6Q8WXD5 167 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 LZICQ8WZA0 190 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 NSL1Q96IY1 281 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 MPP4Q96JB8 637 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 POLR2J2Q9GZM3 115 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 POLR2J3Q9H1A7 115 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 SLC7A10Q9NS82 523 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 NDRG3Q9UGV2 375 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 GPR52Q9Y2T5 361 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 NOTCH2Q04721 2471 aa16.69■□□□□ 0.26
RPUSD3-207ENST00000433555 B2RBV5 119 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 MS4A18H0YCH9 400 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 PDLIM1O00151 329 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 ARPC2O15144 300 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 PRSS23O95084 383 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 CH25HO95992 272 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 HLA-DOBP13765 273 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 ITGADQ13349 1161 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 MS4A18Q3C1V0 323 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 SAMD4BQ5PRF9 694 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 TTC33Q6PID6 262 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 BHLHA15Q7RTS1 189 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 AAED1Q7RTV5 226 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 UBE2J2Q8N2K1 259 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 C10orf53Q8N6V4 93 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 LRRC17Q8N6Y2 441 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 KISS1RQ969F8 398 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 HS3ST6Q96QI5 342 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 POLDIP3Q9BY77 421 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 CLEC4MQ9H2X3 399 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 C20orf141Q9NUB4 165 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 MRPL39Q9NYK5 338 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 RHCGQ9UBD6 479 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 V9GYQ6 96 aa16.68■□□□□ 0.26
RPUSD3-207ENST00000433555 LRBAP50851 2863 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 AKAP9Q99996 3911 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 ENO4A6NNW6 628 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 VAMP5O95183 116 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 CNOT4O95628 575 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 IFNW1P05000 195 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 IL32P24001 234 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 CLDN17P56750 224 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 FAPQ12884 760 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 P2RY6Q15077 328 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 C9orf135Q5VTT2 229 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 NIPAL3Q6P499 406 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 NHLRC1Q6VVB1 395 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 H1FNTQ75WM6 255 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 LINGO2Q7L985 606 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 CDC20BQ86Y33 519 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 WFDC8Q8IUA0 241 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 OFCC1Q8IZS5 231 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 ZNF433Q8N7K0 673 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 SCAIQ8N9R8 606 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 OXGR1Q96P68 337 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 ASPNQ9BXN1 380 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 OR10A4Q9H209 315 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 SLCO5A1Q9H2Y9 848 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 DCAF13Q9NV06 445 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 B3GALT5Q9Y2C3 310 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 CORINQ9Y5Q5 1042 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 ABCA4P78363 2273 aa16.67■□□□□ 0.26
RPUSD3-207ENST00000433555 TEX15Q9BXT5 2789 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 RAD51DO75771 328 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 MT-ATP6P00846 226 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 SEMG1P04279 462 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 NQO1P15559 274 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 PPP3CBP16298 524 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 ATP6V1B2P21281 511 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 CALB2P22676 271 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 TAB1Q15750 504 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 STEAP2Q8NFT2 490 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 ALKBH3Q96Q83 286 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 SLC19A3Q9BZV2 496 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 LIME1Q9H400 295 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 FKRPQ9H9S5 495 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 FANCFQ9NPI8 374 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 NDE1Q9NXR1 346 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 MAGEL2Q9UJ55 1249 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 RPS6KA6Q9UK32 745 aa16.66■□□□□ 0.26
RPUSD3-207ENST00000433555 ANKRD17O75179 2603 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 PLPP3O14495 311 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 KLF4O43474 513 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 UPK3AO75631 287 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 PDE5AO76074 875 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 ZNF432O94892 652 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 UBOX5O94941 541 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 THRBP10828 461 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 DNAJA1P31689 397 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 RBM34P42696 430 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 IL1RL1Q01638 556 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 POU3F1Q03052 451 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 PMS2P3Q13401 168 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 MFSD13AQ14CX5 517 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 FKBP9P1Q75LS8 142 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 TRPM8Q7Z2W7 1104 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 MEX3DQ86XN8 651 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 OR5J2Q8NH18 312 aa16.65■□□□□ 0.26
RPUSD3-207ENST00000433555 TMEM239Q8WW34 195 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms