RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 H1F0P07305 194 aaKnown RBP13.77□□□□□ -0.21
TREX1-201ENST00000433541 RHCEP18577 417 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 VLDLRP98155 873 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 ZNF74Q16587 644 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 FAM98BQ52LJ0 330 aaKnown RBP13.77□□□□□ -0.21
TREX1-201ENST00000433541 FBXW10Q5XX13 1052 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 ZNF474Q6S9Z5 364 aaPredicted RBP13.77□□□□□ -0.21
TREX1-201ENST00000433541 DMRTC2Q8IXT2 367 aaPredicted RBP13.77□□□□□ -0.21
TREX1-201ENST00000433541 SCAIQ8N9R8 606 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 OR5J2Q8NH18 312 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 SGTBQ96EQ0 304 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 OXGR1Q96P68 337 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 MED18Q9BUE0 208 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 FKRPQ9H9S5 495 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 NDRG3Q9UGV2 375 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 PRSS50Q9UI38 385 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 ING1Q9UK53 422 aaPredicted RBP13.77□□□□□ -0.21
TREX1-201ENST00000433541 TESMINQ9Y4I5 508 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 ADGRG4Q8IZF6 3080 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 CRYBG3Q68DQ2 2970 aa13.77□□□□□ -0.21
TREX1-201ENST00000433541 BLOC1S5-TXNDC5H3BN57 136 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 EBAG9O00559 213 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 CASKO14936 926 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 RNF13O43567 381 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 ADAP00813 363 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 SAGP10523 405 aaPredicted RBP13.76□□□□□ -0.21
TREX1-201ENST00000433541 IFI30P13284 250 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 IL32P24001 234 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 OR3A2P47893 321 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 CLDN17P56750 224 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 SORDQ00796 357 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 MS4A2Q01362 244 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 POU3F1Q03052 451 aaPredicted RBP13.76□□□□□ -0.21
TREX1-201ENST00000433541 CHRNB3Q05901 458 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 PUDPQ08623 228 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 FLOT2Q14254 428 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 LCN8Q6JVE9 175 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 NIPAL3Q6P499 406 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 SPATA24Q86W54 205 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 OR52J3Q8NH60 311 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 LINC01560Q8TB33 94 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 ZC3HAV1LQ96H79 300 aaKnown RBP13.76□□□□□ -0.21
TREX1-201ENST00000433541 PIP5K1AQ99755 562 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 SPOCK3Q9BQ16 436 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 ENKD1Q9H0I2 346 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 NMNAT1Q9HAN9 279 aaPredicted RBP13.76□□□□□ -0.21
TREX1-201ENST00000433541 MCCC2Q9HCC0 563 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 KRCC1Q9NPI7 259 aaPredicted RBP13.76□□□□□ -0.21
TREX1-201ENST00000433541 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
TREX1-201ENST00000433541 MRPL39Q9NYK5 338 aaKnown RBP13.76□□□□□ -0.21
TREX1-201ENST00000433541 NDUFAF4Q9P032 175 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 ZNF229Q9UJW7 825 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 AURKCQ9UQB9 309 aa13.76□□□□□ -0.21
TREX1-201ENST00000433541 SH3D21A4FU49 640 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 FFAR1O14842 300 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 OR7A10O76100 309 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 GADD45GO95257 159 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 FUT1P19526 365 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 UGT2B10P36537 528 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 SMIM11AP58511 58 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 LTBQ06643 244 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 FAPQ12884 760 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 ANKRD34AQ69YU3 496 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 CREB3L2Q70SY1 520 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 CXorf67Q86X51 503 aaPredicted RBP13.75□□□□□ -0.21
TREX1-201ENST00000433541 NRMQ8IXM6 262 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 LRRC17Q8N6Y2 441 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 ADPRHL1Q8NDY3 354 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 ACOT11Q8WXI4 607 aaPredicted RBP13.75□□□□□ -0.21
TREX1-201ENST00000433541 KISS1RQ969F8 398 aaPredicted RBP13.75□□□□□ -0.21
TREX1-201ENST00000433541 POP5Q969H6 163 aaKnown RBP13.75□□□□□ -0.21
TREX1-201ENST00000433541 BPIFA2Q96DR5 249 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 ZNF385AQ96PM9 386 aaKnown RBP13.75□□□□□ -0.21
TREX1-201ENST00000433541 ZNF347Q96SE7 839 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 ZNF426Q9BUY5 554 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 C20orf141Q9NUB4 165 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 NOX1Q9Y5S8 564 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 CENPEQ02224 2701 aa13.75□□□□□ -0.21
TREX1-201ENST00000433541 CIB4A0PJX0 185 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 PLPP3O14495 311 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 GSC2O15499 205 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 LYZL6O75951 148 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 RRM2P31350 389 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 DNAJA1P31689 397 aaKnown RBP13.74□□□□□ -0.21
TREX1-201ENST00000433541 ERFP50548 548 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 P2RY4P51582 365 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 TRAP1Q12931 704 aaKnown RBP13.74□□□□□ -0.21
TREX1-201ENST00000433541 POU4F3Q15319 338 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 C9orf135Q5VTT2 229 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 CARD17Q5XLA6 110 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 FBXW9Q5XUX1 488 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 Q6ZT83 130 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 ABHD12BQ7Z5M8 362 aaPredicted RBP13.74□□□□□ -0.21
TREX1-201ENST00000433541 MEX3DQ86XN8 651 aaKnown RBP13.74□□□□□ -0.21
TREX1-201ENST00000433541 PIK3C3Q8NEB9 887 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 C7orf34Q96L11 122 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 CADM1Q9BY67 442 aaKnown RBP13.74□□□□□ -0.21
TREX1-201ENST00000433541 SLCO5A1Q9H2Y9 848 aa13.74□□□□□ -0.21
TREX1-201ENST00000433541 ANKRD19PQ9H560 264 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms