RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 IGHV1OR21-1A0A087WYE8 117 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 OR5B21A6NL26 309 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 E9PBE3 544 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 RTEL1-TNFRSF6BF6WH68 1400 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 K7N7A8 449 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 AGTP01019 485 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 IGHV3-23P01764 117 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 TOP1P11387 765 aaKnown RBP4.42□□□□□ -1.7
USP54-206ENST00000433394 ATP1B2P14415 290 aaPredicted RBP4.42□□□□□ -1.7
USP54-206ENST00000433394 SLC2A5P22732 501 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 CMA1P23946 247 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 AQP1P29972 269 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 PTGDSP41222 190 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 GLP1RP43220 463 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 CRYBB2P43320 205 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 CSNK1G2P78368 415 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 BST2Q10589 180 aaKnown RBP4.42□□□□□ -1.7
USP54-206ENST00000433394 ORC2Q13416 577 aaPredicted RBP4.42□□□□□ -1.7
USP54-206ENST00000433394 VGLL4Q14135 290 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 ARMC12Q5T9G4 340 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 BBS5Q8N3I7 341 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 ACOT4Q8N9L9 421 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 SPATA4Q8NEY3 305 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 BBS1Q8NFJ9 593 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 PYROXD1Q8WU10 500 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 ANP32BQ92688 251 aaKnown RBP4.42□□□□□ -1.7
USP54-206ENST00000433394 FGF11Q92914 225 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP54-206ENST00000433394 MTMR9Q96QG7 549 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 CNN2Q99439 309 aaKnown RBP4.42□□□□□ -1.7
USP54-206ENST00000433394 FMO2Q99518 471 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 GBA3Q9H227 469 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 ANKRD19PQ9H560 264 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 MRPL47Q9HD33 250 aaKnown RBP4.42□□□□□ -1.7
USP54-206ENST00000433394 SH2D2AQ9NP31 389 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 TNFRSF19Q9NS68 423 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 MOKQ9UQ07 419 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 KCNIP3Q9Y2W7 256 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 CCDC141Q6ZP82 1450 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 TEX14Q8IWB6 1497 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 FANCIQ9NVI1 1328 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 ANKRD30AQ9BXX3 1397 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 PLXNC1O60486 1568 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 TTC37Q6PGP7 1564 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 DAPK1P53355 1430 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 SETD5Q9C0A6 1442 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 IGLV3-10A0A075B6K4 115 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 SMCO3A2RU48 225 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 FOXE1O00358 373 aaPredicted RBP4.41□□□□□ -1.7
USP54-206ENST00000433394 ERLIN1O75477 346 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 STAMBPO95630 424 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 HSPB1P04792 205 aaKnown RBP4.41□□□□□ -1.7
USP54-206ENST00000433394 ETS2P15036 469 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 ABOP16442 354 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 CHMLP26374 656 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 ERVK-25P63136 954 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 GRB7Q14451 532 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 KLF17Q5JT82 389 aaPredicted RBP4.41□□□□□ -1.7
USP54-206ENST00000433394 TMEM107Q6UX40 140 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 KDM7AQ6ZMT4 941 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 CDR2LQ86X02 465 aaPredicted RBP4.41□□□□□ -1.7
USP54-206ENST00000433394 ERI1Q8IV48 349 aaKnown RBP4.41□□□□□ -1.7
USP54-206ENST00000433394 PRR22Q8IZ63 422 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 BRSK1Q8TDC3 778 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 PLEKHA8Q96JA3 519 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 NAT9Q9BTE0 207 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 RNF126Q9BV68 326 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 ACTR6Q9GZN1 396 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 SLC25A22Q9H936 323 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 PSMC3IPQ9P2W1 217 aaPredicted RBP4.41□□□□□ -1.7
USP54-206ENST00000433394 Q9UF83 564 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 UGT2A1Q9Y4X1 527 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 FANCAO15360 1455 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 ABCC1P33527 1531 aa4.41□□□□□ -1.7
USP54-206ENST00000433394 CD109Q6YHK3 1445 aa4.4□□□□□ -1.7
USP54-206ENST00000433394 MAP3K4Q9Y6R4 1608 aa4.4□□□□□ -1.7
USP54-206ENST00000433394 A0A1W2PQ72 361 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 EPOPA6NHQ4 379 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 ZNF716A6NP11 495 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 PSTPIP1O43586 416 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 MMP1P03956 469 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 P0C879 139 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 ZNF735P0CB33 412 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 DDOSTP39656 456 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 KIR2DS4P43632 304 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 ARRB1P49407 418 aaPredicted RBP4.4□□□□□ -1.71
USP54-206ENST00000433394 TAF6P49848 677 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 KPNA2P52292 529 aaKnown RBP4.4□□□□□ -1.71
USP54-206ENST00000433394 CUL2Q13617 745 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 TGFBIQ15582 683 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 ZNF239Q16600 458 aaKnown RBP4.4□□□□□ -1.71
USP54-206ENST00000433394 RNASEKQ6P5S7 137 aaKnown RBP4.4□□□□□ -1.71
USP54-206ENST00000433394 CCDC73Q6ZRK6 1079 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 CENPQQ7L2Z9 268 aaPredicted RBP4.4□□□□□ -1.71
USP54-206ENST00000433394 SLC26A11Q86WA9 606 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 CATSPER1Q8NEC5 780 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 OR51S1Q8NGJ8 323 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 MRPL45Q9BRJ2 306 aaKnown RBP4.4□□□□□ -1.71
USP54-206ENST00000433394 CENPKQ9BS16 269 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms