RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 VASH1Q7L8A9 365 aaPredicted RBP17.72■□□□□ 0.43
VRK2-205ENST00000432057 CHPT1Q8WUD6 406 aa17.72■□□□□ 0.43
VRK2-205ENST00000432057 TSSK2Q96PF2 358 aa17.72■□□□□ 0.43
VRK2-205ENST00000432057 NDEL1Q9GZM8 345 aa17.72■□□□□ 0.43
VRK2-205ENST00000432057 KLRF1Q9NZS2 232 aa17.72■□□□□ 0.43
VRK2-205ENST00000432057 MED11Q9P086 117 aa17.72■□□□□ 0.43
VRK2-205ENST00000432057 GRHPRQ9UBQ7 328 aa17.72■□□□□ 0.43
VRK2-205ENST00000432057 CFAP54Q96N23 3096 aa17.72■□□□□ 0.43
VRK2-205ENST00000432057 A8MVM7 634 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 C11orf98E9PRG8 122 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 AVPR2P30518 371 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 TP53I3Q53FA7 332 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 CCDC157Q569K6 752 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 C1orf140Q5VVS0 124 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 ARL9Q6T311 187 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 TMEM91Q6ZNR0 172 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 MAMDC2Q7Z304 686 aaPredicted RBP17.71■□□□□ 0.43
VRK2-205ENST00000432057 GPALPP1Q8IXQ4 340 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 PARP16Q8N5Y8 322 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 EXD3Q8N9H8 876 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 OR10G3Q8NGC4 313 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 OR5J2Q8NH18 312 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 SLC22A8Q8TCC7 542 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 ELP5Q8TE02 316 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 TTC9Q92623 222 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 MED18Q9BUE0 208 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 ZNF346Q9UL40 294 aaKnown RBP17.71■□□□□ 0.43
VRK2-205ENST00000432057 NOX1Q9Y5S8 564 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 MAGEB4O15481 346 aaPredicted RBP17.71■□□□□ 0.43
VRK2-205ENST00000432057 KLF7O75840 302 aaPredicted RBP17.71■□□□□ 0.43
VRK2-205ENST00000432057 RGS9O75916 674 aaPredicted RBP17.71■□□□□ 0.43
VRK2-205ENST00000432057 GLCEO94923 617 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 PRKCAP17252 672 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 CCKBRP32239 447 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 TMED10P49755 219 aaKnown RBP17.71■□□□□ 0.43
VRK2-205ENST00000432057 E2F1Q01094 437 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 RUNX1T1Q06455 604 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 GPR50Q13585 617 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 LINC01590Q5TEZ4 76 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 RPTNQ6XPR3 784 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 CCDC190Q86UF4 302 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 TMEM234Q8WY98 164 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 COQ7Q99807 217 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 TAS2R5Q9NYW4 299 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 DAPK2Q9UIK4 370 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 COPS3Q9UNS2 423 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 GRIP1Q9Y3R0 1128 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 B3GALT1Q9Y5Z6 326 aa17.71■□□□□ 0.43
VRK2-205ENST00000432057 IGHV1-45A0A0A0MS14 117 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 RGS5O15539 181 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 MT-ATP6P00846 226 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 FBXO45P0C2W1 286 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 OR2T7P0C7T2 308 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 PTGDSP41222 190 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 SLC25A1P53007 311 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 IL10RAQ13651 578 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.7■□□□□ 0.42
VRK2-205ENST00000432057 FAM69AQ5T7M9 428 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 ARSKQ6UWY0 536 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 OR2T27Q8NH04 317 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 ST8SIA1Q92185 356 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 RASL10BQ96S79 203 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 ALG12Q9BV10 488 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 PPP4R1LQ9P1A2 415 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 PLEKHB1Q9UF11 243 aaPredicted RBP17.7■□□□□ 0.42
VRK2-205ENST00000432057 VDAC3Q9Y277 283 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 R4GN57 208 aa17.7■□□□□ 0.42
VRK2-205ENST00000432057 IQCMA0A1B0GVH7 501 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 SHISA3A0PJX4 238 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 B4E171 279 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 AHSA1O95433 338 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 COX6A1P12074 109 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 GRPRP30550 384 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 ETV6P41212 452 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 TSPAN7P41732 249 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 HTR3AP46098 478 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 SUMO3P55854 103 aaPredicted RBP17.69■□□□□ 0.42
VRK2-205ENST00000432057 CAV3P56539 151 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 ZNF45Q02386 682 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 SGCBQ16585 318 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 EMC4Q5J8M3 183 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 ZNF517Q6ZMY9 492 aaPredicted RBP17.69■□□□□ 0.42
VRK2-205ENST00000432057 LAX1Q8IWV1 398 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 NLGN4YQ8NFZ3 816 aaPredicted RBP17.69■□□□□ 0.42
VRK2-205ENST00000432057 STK35Q8TDR2 534 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 ABTB1Q969K4 478 aaPredicted RBP17.69■□□□□ 0.42
VRK2-205ENST00000432057 LOXL4Q96JB6 756 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 CEP19Q96LK0 163 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 CMKLR1Q99788 373 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 CCDC86Q9H6F5 360 aaKnown RBP17.69■□□□□ 0.42
VRK2-205ENST00000432057 METTL7AQ9H8H3 244 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 ABCB10Q9NRK6 738 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 PCDHGB6Q9Y5F9 930 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 PCDHGA5Q9Y5G8 931 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 HS3ST3B1Q9Y662 390 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 CASKO14936 926 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 PLGP00747 810 aaPredicted RBP17.69■□□□□ 0.42
VRK2-205ENST00000432057 TNFSF8P32971 234 aa17.69■□□□□ 0.42
VRK2-205ENST00000432057 TAS2R43P59537 309 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms