RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TMEM163Q8TC26 289 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 Q96MT0 163 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 NRIP3Q9NQ35 241 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 CLN6Q9NWW5 311 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 AASSQ9UDR5 926 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 SLC6A5Q9Y345 797 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 TRAV17A0A0B4J275 112 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 GJE1A6NN92 205 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 MCIDASD6RGH6 385 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 ARPC3O15145 178 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 IDH3BO43837 385 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 TRAPPC6AO75865 159 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 IMPDH2P12268 514 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 PEPDP12955 493 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 APEHP13798 732 aaKnown RBP16.39■□□□□ 0.21
HMGN1-206ENST00000431390 GTF2E2P29084 291 aaKnown RBP16.39■□□□□ 0.21
HMGN1-206ENST00000431390 FMO3P31513 532 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 RPL4P36578 427 aaKnown RBP16.39■□□□□ 0.21
HMGN1-206ENST00000431390 AQP2P41181 271 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 PLGLB1Q02325 96 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 RPL18Q07020 188 aaKnown RBP16.39■□□□□ 0.21
HMGN1-206ENST00000431390 MYBPHQ13203 477 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 OR7A5Q15622 319 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 OCLNQ16625 522 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 ALG10Q5BKT4 473 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 MEDAGQ5VYS4 303 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 ARHGAP11AQ6P4F7 1023 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 MOSPD2Q8NHP6 518 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 PLEKHA8Q96JA3 519 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 IL4I1Q96RQ9 567 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 CMC2Q9NRP2 79 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 PLCXD1Q9NUJ7 323 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 ALKBH4Q9NXW9 302 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 TRAPPC4Q9Y296 219 aa16.39■□□□□ 0.21
HMGN1-206ENST00000431390 TLN1Q9Y490 2541 aaKnown RBP16.39■□□□□ 0.21
HMGN1-206ENST00000431390 TLX2O43763 284 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-206ENST00000431390 PPP1R3DO95685 299 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 CD14P08571 375 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 GABARAPL2P60520 117 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 TLE1Q04724 770 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 PMS2P3Q13401 168 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 TMEM176BQ3YBM2 270 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-206ENST00000431390 GXYLT1Q4G148 440 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SLC22A16Q86VW1 577 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 ZADH2Q8N4Q0 377 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 FAM98AQ8NCA5 519 aaKnown RBP16.38■□□□□ 0.21
HMGN1-206ENST00000431390 BPIFB6Q8NFQ5 453 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 DNAJA3Q96EY1 480 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SFXN2Q96NB2 322 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 OR5B2Q96R09 309 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 FN3KQ9H479 309 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 TMEM185BQ9H7F4 350 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SCN3BQ9NY72 215 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SCOCQ9UIL1 159 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 TPRKBQ9Y3C4 175 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 PCDHGB7Q9Y5F8 929 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 CSAG2Q9Y5P2 127 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 M0R082 166 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 PLPP3O14495 311 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SMNDC1O75940 238 aaKnown RBP eCLIP16.38■□□□□ 0.214e-7■■■■□ 21.6
HMGN1-206ENST00000431390 PMS2P2O95744 297 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SHC1P29353 583 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SFTPDP35247 375 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 ZP4Q12836 540 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 WIPI1Q5MNZ9 446 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-206ENST00000431390 BORAQ6PGQ7 559 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-206ENST00000431390 TMEM251Q8N6I4 163 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 ADPRHL1Q8NDY3 354 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF417Q8TAU3 575 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 MIB2Q96AX9 1013 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 ERMAPQ96PL5 475 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-206ENST00000431390 ZNF587Q96SQ5 575 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-206ENST00000431390 SLC25A18Q9H1K4 315 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 TAS2R5Q9NYW4 299 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 B3GALT5Q9Y2C3 310 aa16.38■□□□□ 0.21
HMGN1-206ENST00000431390 TNRC6AQ8NDV7 1962 aaKnown RBP16.37■□□□□ 0.21
HMGN1-206ENST00000431390 ACOT7O00154 380 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 IMPA2O14732 288 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 OR6A2O95222 327 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 IFNGP01579 166 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 ADORA3P0DMS8 318 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 NOS3P29474 1203 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 RFC3P40938 356 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 GFRA1P56159 465 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 SMN1Q16637 294 aaKnown RBP16.37■□□□□ 0.21
HMGN1-206ENST00000431390 TMPPEQ6ZT21 453 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 H1FNTQ75WM6 255 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-206ENST00000431390 IGFN1Q86VF2 1251 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 TSPAN14Q8NG11 270 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 KLHL15Q96M94 604 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 KATNB1Q9BVA0 655 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 CHST11Q9NPF2 352 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 FANCFQ9NPI8 374 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 SEC14L4Q9UDX3 406 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 KLHL21Q9UJP4 597 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 IER3IP1Q9Y5U9 82 aa16.37■□□□□ 0.21
HMGN1-206ENST00000431390 A0A1W2PNR3 127 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 RIIAD1A6NNX1 92 aa16.36■□□□□ 0.21
HMGN1-206ENST00000431390 FAM166BA8MTA8 275 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms