RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 FKRPQ9H9S5 495 aa13.3□□□□□ -0.28
PHF1-204ENST00000427826 BARX1Q9HBU1 254 aaPredicted RBP13.3□□□□□ -0.28
PHF1-204ENST00000427826 MOV10Q9HCE1 1003 aaKnown RBP13.3□□□□□ -0.28
PHF1-204ENST00000427826 RCE1Q9Y256 329 aa13.3□□□□□ -0.28
PHF1-204ENST00000427826 A0A087WUJ7 227 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 LOC102725191A0A1B0GVB3 256 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 SMAD7O15105 426 aaKnown RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 AKAP8O43823 692 aaKnown RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 FMO6PO60774 539 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 TROVE2P10155 538 aaKnown RBP eCLIP13.29□□□□□ -0.28
PHF1-204ENST00000427826 CDH2P19022 906 aaPredicted RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 SELENOPP49908 381 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 SH3BGRP55822 239 aaPredicted RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 PCBP3P57721 371 aaKnown RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 MTPNP58546 118 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 OR1Q1Q15612 314 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 CLEC12BQ2HXU8 276 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 INTS11Q5TA45 600 aaKnown RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 HMBOX1Q6NT76 420 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 PATL1Q86TB9 770 aaKnown RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 RETREG3Q86VR2 466 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 PTOV1Q86YD1 416 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 FBXL14Q8N1E6 418 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 ADPRHL1Q8NDY3 354 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 ANKK1Q8NFD2 765 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 SH3GL1Q99961 368 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 C1QTNF6Q9BXI9 259 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 LINC00470Q9BZP3 86 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 KAT8Q9H7Z6 458 aaKnown RBP13.29□□□□□ -0.28
PHF1-204ENST00000427826 CORINQ9Y5Q5 1042 aa13.29□□□□□ -0.28
PHF1-204ENST00000427826 USF3Q68DE3 2245 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 A0A0B4J2E0 115 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 A0A1B0GX12 115 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 E7EQL1 145 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 M0QX08 132 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 M0R082 166 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 SLC43A1O75387 559 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 LY6G6DO95868 133 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 LGI1O95970 557 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 CD8AP01732 235 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 VIMP08670 466 aaKnown RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 BMP4P12644 408 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 HOXB4P17483 251 aaPredicted RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 GRPRP30550 384 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 TTKP33981 857 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 CDKN1AP38936 164 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 CLDN17P56750 224 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 UBE2NP61088 152 aaKnown RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 IL1RL1Q01638 556 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 DMTNQ08495 405 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 CYLC2Q14093 348 aaPredicted RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 NRF1Q16656 503 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 ZNF544Q6NX49 715 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 COMTD1Q86VU5 262 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 LSRQ86X29 649 aaPredicted RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 KDM8Q8N371 416 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 ZNF417Q8TAU3 575 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 RASSF5Q8WWW0 418 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 ADAD1Q96M93 576 aaKnown RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 HS6ST2Q96MM7 605 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 ZNF587Q96SQ5 575 aaPredicted RBP13.28□□□□□ -0.28
PHF1-204ENST00000427826 PRR14Q9BWN1 585 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 TMEM120AQ9BXJ8 343 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 ASPNQ9BXN1 380 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 KLHL14Q9P2G3 628 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 CADP27708 2225 aa13.28□□□□□ -0.28
PHF1-204ENST00000427826 IGKV1D-42A0A075B6H8 117 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 RPL36A-HNRNPH2H7BZ11 118 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 NPPAP01160 153 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 NQO1P15559 274 aaKnown RBP13.27□□□□□ -0.29
PHF1-204ENST00000427826 FABP6P51161 128 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 CDH12P55289 794 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 TNK1Q13470 666 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 HIKESHIQ53FT3 197 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 ANKRD16Q6P6B7 361 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 ZNF613Q6PF04 617 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 Q71RC1 249 aaPredicted RBP13.27□□□□□ -0.29
PHF1-204ENST00000427826 MUC15Q8N387 334 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 SCAIQ8N9R8 606 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 SMYD1Q8NB12 490 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 PIK3C3Q8NEB9 887 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 OR1K1Q8NGR3 316 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 MAGEE2Q8TD90 523 aaPredicted RBP13.27□□□□□ -0.29
PHF1-204ENST00000427826 SLC26A7Q8TE54 656 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 MCHR1Q99705 422 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 TMEM43Q9BTV4 400 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 CBLN4Q9NTU7 201 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 ATP23Q9Y6H3 246 aa13.27□□□□□ -0.29
PHF1-204ENST00000427826 TPST2O60704 377 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 UPK3AO75631 287 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 ZNF432O94892 652 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 PCGF2P35227 344 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 ARFIP2P53365 341 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 SLC25A3Q00325 362 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
PHF1-204ENST00000427826 CHRNB3Q05901 458 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 VEZF1Q14119 521 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 SELPLGQ14242 412 aa13.26□□□□□ -0.29
PHF1-204ENST00000427826 MAPRE2Q15555 327 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms