RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 UNGP13051 313 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 CHATP28329 748 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 CD1BP29016 333 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 MAP2K3P46734 347 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TAS2R46P59540 309 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 MEX3DQ86XN8 651 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 ETFBKMTQ8IXQ9 262 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TMEM130Q8N3G9 435 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ACBD7Q8N6N7 88 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 MRI1Q9BV20 369 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 NMNAT2Q9BZQ4 307 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 DCSTAMPQ9H295 470 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TOR3AQ9H497 397 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ANKRD19PQ9H560 264 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 AMBNQ9NP70 447 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ARMC1Q9NVT9 282 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PCDHGA5Q9Y5G8 931 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 OR6C76A6NM76 312 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PVRP15151 417 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 CTRB1P17538 263 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 BLVRBP30043 206 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 CDKN2CP42773 168 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PPP1CAP62136 330 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 HTRA4P83105 476 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 TLE4Q04727 773 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 EIF3IQ13347 325 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 DUSP6Q16828 381 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 DUSP7Q16829 419 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 NXNL2Q5VZ03 156 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 CTRB2Q6GPI1 263 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 LPCAT3Q6P1A2 487 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 C6orf89Q6UWU4 347 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 B3GLCTQ6Y288 498 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TEX26Q8N6G2 289 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PACRGLQ8N7B6 248 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 WDR31Q8NA23 367 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 FNDC9Q8TBE3 224 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 KISS1RQ969F8 398 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZNF775Q96BV0 537 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 DPH3Q96FX2 82 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZNF587Q96SQ5 575 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 ATP5SQ99766 215 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 TMEM208Q9BTX3 173 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 BARX1Q9HBU1 254 aaPredicted RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 DMRT3Q9NQL9 472 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PDLIM7Q9NR12 457 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 SLC22A11Q9NSA0 550 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 ZDHHC2Q9UIJ5 367 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 PCDHGA9Q9Y5G4 932 aaKnown RBP5.33□□□□□ -1.56
HERC4-206ENST00000427635 IER3IP1Q9Y5U9 82 aa5.33□□□□□ -1.56
HERC4-206ENST00000427635 FAM171A2A8MVW0 826 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ANGPTL7O43827 346 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ARSBP15848 533 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 BDKRB2P30411 391 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 MTCP1P56278 107 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 RAB35Q15286 201 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 PODNL1Q6PEZ8 512 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 DCXRQ7Z4W1 244 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 CCDC71Q8IV32 467 aaPredicted RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 SFTPA2Q8IWL1 248 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 SFTPA1Q8IWL2 248 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 MS4A15Q8N5U1 240 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 OR2A12Q8NGT7 310 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 M1APQ8TC57 530 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ROBO4Q8WZ75 1007 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 PDLIM2Q96JY6 352 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 KCNA7Q96RP8 456 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 DPH1Q9BZG8 443 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 GOLT1BQ9Y3E0 138 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 CAMTA1Q9Y6Y1 1673 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 LINC01553A4QN01 128 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ZNF785A8K8V0 405 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 RNASEK-C17orf49H0YIS7 233 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ZNF264O43296 627 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 APEHP13798 732 aaKnown RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 CELP19835 753 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 RAB3BP20337 219 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 MAOAP21397 527 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 HOXA11P31270 313 aaPredicted RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 TAGLN2P37802 199 aaKnown RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 CD97P48960 835 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ERVPABLB-1P60509 514 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 SLC35A2P78381 396 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 EXOSC7Q15024 291 aaKnown RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 SLC22A6Q4U2R8 563 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 KLHDC10Q6PID8 442 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 SKA3Q8IX90 412 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 KRTCAP2Q8N6L1 136 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ACOT4Q8N9L9 421 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 SLC7A13Q8TCU3 470 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 MIB2Q96AX9 1013 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 C12orf43Q96C57 262 aaKnown RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 MRPS24Q96EL2 167 aaKnown RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 PKIBQ9C010 78 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 RDH14Q9HBH5 336 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 NPFFR2Q9Y5X5 522 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 FAM159BA6NKW6 160 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 ZNF487B1APH4 448 aa5.32□□□□□ -1.56
HERC4-206ENST00000427635 KDM4EB2RXH2 506 aaPredicted RBP5.32□□□□□ -1.56
HERC4-206ENST00000427635 RAB27BO00194 218 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms