RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 Q6ZSR3 168 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 Q71RC1 249 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 SMIM15Q7Z3B0 74 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PGAM4Q8N0Y7 254 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CLIP4Q8N3C7 705 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 Q8N402 240 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM156Q8N614 296 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 C15orf54Q8N8G6 183 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CCDC71LQ8N9Z2 235 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 LMNTD1Q8N9Z9 388 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ZSCAN4Q8NAM6 433 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 OR10V1Q8NGI7 309 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 OR1B1Q8NGR6 318 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 OR52N5Q8NH56 324 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 LYPD6BQ8NI32 183 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 GPR148Q8TDV2 347 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 AENQ8WTP8 325 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PHLDA1Q8WV24 401 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 RND1Q92730 232 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 TFGQ92734 400 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 RORBQ92753 470 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ART4Q93070 314 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 MRPL24Q96A35 216 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 NTAN1Q96AB6 310 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ZBED6CLQ96FA7 236 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 RNF145Q96MT1 663 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 NOL4LQ96MY1 436 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 WFIKKN1Q96NZ8 548 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 LGMNQ99538 433 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ATP5SQ99766 215 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 UTP23Q9BRU9 249 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 APOOQ9BUR5 198 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 TRAF4Q9BUZ4 470 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ZYG11BQ9C0D3 744 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ING2Q9H160 280 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 OR51M1Q9H341 326 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 EBF3Q9H4W6 596 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PATZ1Q9HBE1 687 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 DCAF13Q9NV06 445 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PLEKHJ1Q9NW61 149 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 SPATA2Q9UM82 520 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 SLC17A4Q9Y2C5 497 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 YARS2Q9Y2Z4 477 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 DHRS7Q9Y394 339 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 EXOSC1Q9Y3B2 195 aaKnown RBP3.22□□□□□ -1.89
SF3B1-205ENST00000424674 PTGDR2Q9Y5Y4 395 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 CACNG2Q9Y698 323 aa3.22□□□□□ -1.89
SF3B1-205ENST00000424674 ADGRL3Q9HAR2 1447 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 NPIPA5A0A0B4J1W7 369 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 TRBV5-5A0A0J9YX44 114 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 TEX13DA0A0J9YY54 714 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 A0A1W2PQL4 384 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 PSMB11A5LHX3 300 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 C5orf60A6NFR6 353 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 SRRM4A7MD48 611 aaKnown RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 NPIPA5E9PKD4 350 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 H7C0C1 242 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 PLPP3O14495 311 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 ADAM10O14672 748 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 SGCEO43556 437 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 EFNA2O43921 213 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 EIF4E2O60573 245 aaKnown RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 WISP2O76076 250 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 TNFAIP8O95379 198 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 SYF2O95926 243 aaKnown RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 APOEP02649 317 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 ATP1B1P05026 303 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 FGF2P09038 288 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 HOXC6P09630 235 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 LHCGRP22888 699 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 G0S2P27469 103 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 CALCRP30988 508 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 RPL3P39023 403 aaKnown RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 VHLP40337 213 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 OPRD1P41143 372 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 BDKRB1P46663 353 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 IDH2P48735 452 aaKnown RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 KPNA2P52292 529 aaKnown RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 CLDN6P56747 220 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 VLDLRP98155 873 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 MYL7Q01449 175 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 POU3F1Q03052 451 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 ST3GAL3Q11203 375 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 SMARCB1Q12824 385 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 BNIP2Q12982 314 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 ZNHIT3Q15649 155 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 C3AR1Q16581 482 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF74Q16587 644 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 ATP6V1FQ16864 119 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 PGGHGQ32M88 737 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 GTDC1Q4AE62 458 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 Q4G0T1 1027 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 TMEM35AQ53FP2 167 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 YIF1BQ5BJH7 314 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 RESP18Q5W5W9 173 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 OR5M10Q6IEU7 315 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 FAHD2BQ6P2I3 314 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-205ENST00000424674 FAHD1Q6P587 224 aa3.21□□□□□ -1.9
SF3B1-205ENST00000424674 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms