RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 IL5RAQ01344 420 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 RPL18Q07020 188 aaKnown RBP12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 TMED1Q13445 227 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 LY6DQ14210 128 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 ZNF169Q14929 603 aaPredicted RBP12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 SLC10A1Q14973 349 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 ALG10Q5BKT4 473 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 TMEM236Q5W0B7 351 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 SLC6A19Q695T7 634 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 ARHGAP11AQ6P4F7 1023 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 POMZP3Q6PJE2 187 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 NHLRC1Q6VVB1 395 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 PTCHD4Q6ZW05 846 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 NANOGNBQ7Z5D8 188 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 PXKQ7Z7A4 578 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 GGNQ86UU5 652 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 MEX3DQ86XN8 651 aaKnown RBP12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 TMEM163Q8TC26 289 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 KLHL15Q96M94 604 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 ENKD1Q9H0I2 346 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 MRPS18AQ9NVS2 196 aaKnown RBP12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 BLOC1S6Q9UL45 172 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 PCDHGB5Q9Y5G0 923 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 ZNF462Q96JM2 2506 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 SHISA8B8ZZ34 492 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 B8ZZF3 427 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 AHCYL1O43865 530 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 CCNA2P20248 432 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 CRHBPP24387 322 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 GRPRP30550 384 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 SDHAP31040 664 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 DIO1P49895 249 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 TPD52P55327 224 aaPredicted RBP12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 GABARAPL2P60520 117 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 FOXK1P85037 733 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 POU4F3Q15319 338 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 TMEM176BQ3YBM2 270 aaPredicted RBP12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 AADACL4Q5VUY2 407 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 FAM205BPQ63HN1 556 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 CCDC103Q8IW40 242 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 C10orf53Q8N6V4 93 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 EXD3Q8N9H8 876 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 SFXN2Q96NB2 322 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 DDOQ99489 341 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 IFT27Q9BW83 186 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 CHST11Q9NPF2 352 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 TVP23BQ9NYZ1 205 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 KLHL21Q9UJP4 597 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 RPH3AQ9Y2J0 694 aaPredicted RBP12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 CSAG2Q9Y5P2 127 aa12.8□□□□□ -0.36
SHMT1P1-201ENST00000419974 PCNX3Q9H6A9 2034 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 AQP7P3A6NL99 342 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 SNTNA6NMZ2 147 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 KDM4EB2RXH2 506 aaPredicted RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 MCIDASD6RGH6 385 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 MS4A18H0YCH9 400 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 H3BML4 177 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 BLOC1S5-TXNDC5H3BN57 136 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 M0R082 166 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 TRAPPC6AO75865 159 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 IFNGP01579 166 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 PIPP12273 146 aaPredicted RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 CPN1P15169 458 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 ZNF708P17019 499 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 AQP2P41181 271 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 MAGEA5P43359 124 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 SLC15A1P46059 708 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 CD97P48960 835 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 LHX2P50458 406 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 PLGLB1Q02325 96 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 PUDPQ08623 228 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 PMS2P3Q13401 168 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR7A5Q15622 319 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 SNAPC1Q16533 368 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 WIPI1Q5MNZ9 446 aaPredicted RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 CLEC12AQ5QGZ9 265 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 NXNL2Q5VZ03 156 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 VASNQ6EMK4 673 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 YRDCQ86U90 279 aaKnown RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 RBMXL3Q8N7X1 1067 aaKnown RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 NEIL3Q8TAT5 605 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 ZNF417Q8TAU3 575 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 IPCEF1Q8WWN9 437 aaPredicted RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 EXTL1Q92935 676 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 ZNF587Q96SQ5 575 aaPredicted RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 SF3B5Q9BWJ5 86 aaKnown RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 TXNIPQ9H3M7 391 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 INIPQ9NRY2 104 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 FKBP14Q9NWM8 211 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 CNOT2Q9NZN8 540 aaKnown RBP12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 RASD1Q9Y272 281 aa12.79□□□□□ -0.36
SHMT1P1-201ENST00000419974 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms