RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DPH7Q9BTV6 452 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 EDEM2Q9BV94 578 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ERVK-6Q9BXR3 956 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SPATC1LQ9H0A9 340 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 GABARAPL1Q9H0R8 117 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SDCBP2Q9H190 292 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 METTL9Q9H1A3 318 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR51V1Q9H2C8 321 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MIXL1Q9H2W2 232 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MEAF6Q9HAF1 191 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PLCXD1Q9NUJ7 323 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ABCB8Q9NUT2 735 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 RBAKQ9NYW8 714 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR6C2Q9NZP2 312 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CCDC167Q9P0B6 97 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 STOX2Q9P2F5 926 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SPASTQ9UBP0 616 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 METTL1Q9UBP6 276 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 HACL1Q9UJ83 578 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 LEF1Q9UJU2 399 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF222Q9UK12 451 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 POMT2Q9UKY4 750 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC7A7Q9UM01 511 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 BTRCQ9Y297 605 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TP53TG5Q9Y2B4 290 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PADI2Q9Y2J8 665 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CHTOPQ9Y3Y2 248 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 V9GYH0 126 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MYH3P11055 1940 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SCN7AQ01118 1682 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 NHSL1Q5SYE7 1610 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ARFGEF2Q9Y6D5 1785 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLIT2O94813 1529 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 PTPRFP10586 1907 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 A0A0J9YYE9 177 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 A0A1B0GV90 55 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 BCLAF3A2AJT9 711 aaKnown RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 C7orf66A4D0T2 115 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 TRAPPC13A5PLN9 417 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 FABP12A6NFH5 140 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 FAM74A7A6NL05 159 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 DUXAA6NLW8 204 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 TMEM210A6NLX4 147 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 C1orf196B1AJZ1 125 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 PRR32B1ATL7 298 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 C5orf58C9J3I9 102 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 HSBP1L1C9JCN9 74 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 D6RAR5 112 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 TSTD3H0UI37 97 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 L7N2F9 121 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 NR5A2O00482 541 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CASC3O15234 703 aaKnown RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 VEGFDO43915 354 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 PRKYO43930 277 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 KIAA0513O60268 411 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 SDC3O75056 442 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 WBP4O75554 376 aaKnown RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 RP2O75695 350 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 POP7O75817 140 aaKnown RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 SC5DO75845 299 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 WISP2O76076 250 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 RECQL5O94762 991 aaPredicted RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 GADD45GO95257 159 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 RAB3DO95716 219 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 PGK1P00558 417 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CST1P01037 141 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 MT-ND1P03886 318 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 SERPINA5P05154 406 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 KLK3P07288 261 aaPredicted RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CHRNGP07510 517 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 APRTP07741 180 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 STSP08842 583 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 HOXC4P09017 264 aaPredicted RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CSF3P09919 207 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC2A1P11166 492 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC2A2P11168 524 aaPredicted RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 ANXA8P13928 327 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 IL1RNP18510 177 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 AZGP1P25311 298 aaKnown RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 EPHA2P29317 976 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CRABP1P29762 137 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CHRNB4P30926 498 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 GPX4P36969 197 aaPredicted RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CRATP43155 626 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 GCLMP48507 274 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 MRPL19P49406 292 aaKnown RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 RBP2P50120 134 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 SUCLG1P53597 346 aaKnown RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 RAG2P55895 527 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 STARD6P59095 220 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 PPP3R1P63098 170 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 DEFA5Q01523 94 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 DHODHQ02127 395 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 GLO1Q04760 184 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 YWHAHQ04917 246 aaPredicted RBP3□□□□□ -1.93
SDCBPP3-201ENST00000419629 LIPEQ05469 1076 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF33AQ06730 810 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 CXCL9Q07325 125 aa3□□□□□ -1.93
SDCBPP3-201ENST00000419629 ECH1Q13011 328 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms