RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 HEXBP07686 556 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 UCHL1P09936 223 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SLC2A2P11168 524 aaPredicted RBP13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 AQP2P41181 271 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ERVK-25P63136 954 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EGR3Q06889 387 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RPL18Q07020 188 aaKnown RBP13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 IL11RAQ14626 422 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ACSM3Q53FZ2 586 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PYDC2Q56P42 97 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZMAT1Q5H9K5 638 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LINC01590Q5TEZ4 76 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FAM205BPQ63HN1 556 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 B3GLCTQ6Y288 498 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZNF517Q6ZMY9 492 aaPredicted RBP13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OVCH1Q7RTY7 1134 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CEACAM19Q7Z692 300 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EXD3Q8N9H8 876 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 OR5J2Q8NH18 312 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RNF138Q8WVD3 245 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 GHSRQ92847 366 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LRRN3Q9H3W5 708 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ZCCHC4Q9H5U6 513 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 KLHL1Q9NR64 748 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CYSLTR2Q9NS75 346 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 C14orf119Q9NWQ9 140 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TAS2R10Q9NYW0 307 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NCDNQ9UBB6 729 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FBXL4Q9UKA2 621 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ITGB1BP2Q9UKP3 347 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 FKBP7Q9Y680 259 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ADAMTS9Q9P2N4 1935 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TNRC18O15417 2968 aaPredicted RBP13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ANKUB1A6NFN9 424 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NOTOA8MTQ0 251 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 A8MU76 341 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CENPBD1B2RD01 187 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 BOLA2-SMG1P6H3BVE0 249 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PDCD5O14737 125 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 LRRTM2O43300 516 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CPNE3O75131 537 aaKnown RBP13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CER1O95813 267 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 NUDT14O95848 222 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 BGLAPP02818 100 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 CSF3P09919 207 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RAB3BP20337 219 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ITPKBP27987 946 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 C1orf189Q5VU69 101 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 AGAP6Q5VW22 663 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 ANKRD37Q7Z713 158 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 PPP1R3BQ86XI6 285 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RAB43Q86YS6 212 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 Q8N402 240 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SCAIQ8N9R8 606 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 RASD2Q96D21 266 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 AGAP4Q96P64 663 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MOGAT1Q96PD6 335 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MARCH7Q9H992 704 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 MUTYHQ9UIF7 546 aa13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 SIRT4Q9Y6E7 314 aaPredicted RBP13.22□□□□□ -0.29
HLA-DPA1-242ENST00000419277 EYSQ5T1H1 3165 aa13.21□□□□□ -0.29
HLA-DPA1-242ENST00000419277 TRBV2A0A0J9YWF9 115 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ETV2O00321 342 aaPredicted RBP13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FLRT2O43155 660 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OIP5O43482 229 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 AHSA1O95433 338 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PRKAR1AP10644 381 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TDGF1P13385 188 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 APEX1P27695 318 aaKnown RBP13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SCAND1P57086 179 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SLC3A1Q07837 685 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 BAK1Q16611 211 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EEF1A1P5Q5VTE0 462 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GUSBP11Q6P575 273 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 APCDD1LQ8NCL9 501 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ASB17Q8WXJ9 295 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 Q96M85 177 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 KLHL15Q96M94 604 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OR6C1Q96RD1 312 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DCLRE1CQ96SD1 692 aaKnown RBP13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 KCNJ15Q99712 375 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SDHAF3Q9NRP4 125 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GNG8Q9UK08 70 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF281Q9Y2X9 895 aa13.21□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 IGHV5-10-1A0A0J9YXX1 117 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LRRN3E7EW58 273 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SOX1O00570 391 aaPredicted RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF208O43345 1280 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SIGLEC6O43699 453 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TPPPO94811 219 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 KRT8P05787 483 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FGF5P12034 268 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NPR2P20594 1047 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FKBP2P26885 142 aaKnown RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 APOBEC1P41238 236 aaKnown RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EFNA3P52797 238 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PITPNAQ00169 270 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 E2F1Q01094 437 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms